DMR 25173 chr1:27845951-27846100 (150bp)

DMR Stats
Positionchr1:27845951-27846100 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesAHDC1 (14655bp away)
ANODEV p-value0.00305322759348
FrequenciesBenign: 1.0 (14.29%), Low: 5.0 (83.33%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
25173 chr1 27845806 27846090 wgEncodeRegDnaseClusteredV2 16 score:579, srow:22552
25173 chr1 27846022 27846441 wgEncodeRegTfbsClusteredV3 POLR2A score:224, expCount:1, expNums:192, expScores:224, srow:80016
25173 chr1 27845933 27845953 tfbsConsSites V$NRSF_01 score:741, zScore:2.22, srow:60494
25173 chr1 27845969 27845992 tfbsConsSites V$HTF_01 score:763, zScore:1.73, srow:60495
25173 chr1 27845971 27845988 tfbsConsSites V$RFX1_02 score:861, zScore:2.48, srow:60496
25173 chr1 27845976 27845994 tfbsConsSites V$SEF1_C score:754, zScore:2.34, srow:60497
25173 chr1 27845990 27846003 tfbsConsSites V$MYCMAX_01 score:792, zScore:1.65, srow:60498
25173 chr1 27845996 27846005 tfbsConsSites V$FOXO1_01 score:953, zScore:1.74, srow:60499
25173 chr1 27845946 27846028 phastConsElements100way lod=570 score:622, srow:114198
25173 chr1 27846032 27846034 phastConsElements100way lod=13 score:247, srow:114199
25173 chr1 27846037 27846047 phastConsElements100way lod=27 score:320, srow:114200
25173 chr1 27846051 27846057 phastConsElements100way lod=15 score:262, srow:114201
25173 chr1 27846088 27846104 phastConsElements100way lod=29 score:327, srow:114202
  • 13 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
25173 cellmeth_recounts PrEC: 2, LNCaP: 9, DU145: 1
25173 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305