DMR 25195 chr1:32092101-32092250 (150bp)
| DMR Stats | |
|---|---|
| Position | chr1:32092101-32092250 (View on UCSC) |
| Width | 150bp |
| Genomic Context | 3' end |
| Nearest Genes | HCRTR1 (0bp away) |
| ANODEV p-value | 0.00958556373033 |
| Frequencies | Benign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 8.0 (88.89 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25195 | HCRTR1 | 571 | uc001btc.4 | chr1 | 32083301 | 32093214 | + | 150 | 100.0 | 2.74 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (100), E9 (0) | 24.0 |
| 25195 | HCRTR1 | 571 | uc001btd.2 | chr1 | 32084641 | 32092919 | + | 150 | 100.0 | 7.76 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (100), E7 (0) | 100.0 |
| 25195 | HCRTR1 | 571 | uc009vtx.2 | chr1 | 32083301 | 32092919 | + | 150 | 100.0 | 0.26 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (100), E9 (0) | 100.0 |
| 25195 | HCRTR1 | 571 | uc010ogl.2 | chr1 | 32084652 | 32098119 | + | 150 | 100.0 | 0.26 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (100), E7 (0) | 0.0 |
- 4 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 25195 | chr1 | 32091726 | 32092495 | wgEncodeRegDnaseClusteredV2 | 45 | score:570, srow:25951 |
| 25195 | chr1 | 32092136 | 32092421 | wgEncodeRegTfbsClusteredV3 | EGR1 | score:1000, expCount:2, expNums:138,216, expScores:152,1000, srow:91969 |
| 25195 | chr1 | 32092170 | 32092182 | tfbsConsSites | V$CHOP_01 | score:851, zScore:2.16, srow:67551 |
| 25195 | chr1 | 32092103 | 32092108 | phastConsElements100way | lod=14 | score:255, srow:129083 |
| 25195 | chr1 | 32092111 | 32092118 | phastConsElements100way | lod=27 | score:320, srow:129084 |
| 25195 | chr1 | 32092143 | 32092150 | phastConsElements100way | lod=20 | score:290, srow:129085 |
| 25195 | chr1 | 32092153 | 32092185 | phastConsElements100way | lod=95 | score:444, srow:129086 |
| 25195 | chr1 | 32092224 | 32092228 | phastConsElements100way | lod=14 | score:255, srow:129087 |
| 25195 | chr1 | 32092239 | 32092247 | phastConsElements100way | lod=19 | score:285, srow:129088 |
- 9 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 25195 | cellmeth_recounts | PrEC: 3, LNCaP: 1, DU145: 1 |  |
| 25195 | cellexp | id=ENSG00000121764, name=HCRTR1, PrEC=2, str=0, LNCaP=1, str=0, DU145=4, str=6 |  |
| 25195 | tcgameth | site:cg16697620, B=0.51, L=0.66, H=0.66 |  |
| 25195 | tcgaexp | gene=HCRTR1, entrez=3061, pos=chr1:32083301-32098119(+), B=1, L=1, M=1, H=1 |  |
| 25195 | tcgaexp | gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305 |  |