DMR 25219 chr1:35586451-35586750 (300bp)

DMR Stats
Positionchr1:35586451-35586750 (View on UCSC)
Width300bp
Genomic Contextintergenic
Nearest GenesZMYM1 (4995bp away)
ANODEV p-value0.00131636300528
FrequenciesBenign: 2.0 (28.57%), Low: 5.0 (83.33%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
25219 chr1 35586341 35586875 wgEncodeRegDnaseClusteredV2 55 score:698, srow:28473
25219 chr1 35586253 35586782 wgEncodeRegTfbsClusteredV3 POLR2A score:468, expCount:3, expNums:105,330,340, expScores:468,151,194, srow:101398
25219 chr1 35586279 35586648 wgEncodeRegTfbsClusteredV3 RUNX3 score:344, expCount:1, expNums:109, expScores:344, srow:101399
25219 chr1 35586343 35586706 wgEncodeRegTfbsClusteredV3 ELF1 score:211, expCount:1, expNums:88, expScores:211, srow:101400
25219 chr1 35586411 35586630 wgEncodeRegTfbsClusteredV3 ZBTB7A score:141, expCount:1, expNums:205, expScores:141, srow:101401
25219 chr1 35586715 35586791 phastConsElements100way lod=15 score:262, srow:147265
25219 chr1 35586332 35586591 cpgIsland CpG: 25 length:260, cpgNum:25, gcNum:178, perCpg:19.2, perGc:68.5, obsExp:0.82, srow:864
25219 chr1 35586592 35588591 cpgShore — values(x.gr)[overs$srow, ]:1556
  • 8 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
25219 cellmeth_recounts PrEC: 1, LNCaP: 13, DU145: 0
25219 tcgameth site:cg14615266, B=0.21, L=0.47, H=0.49
25219 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305