DMR 25266 chr1:41847251-41847550 (300bp)

DMR Stats
Positionchr1:41847251-41847550 (View on UCSC)
Width300bp
Genomic Contextintergenic
Nearest Genes5S_rRNA (85057bp away)
ANODEV p-value0.00035519253642
FrequenciesBenign: 0.0 (0.0%), Low: 6.0 (100.0%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
25266 chr1 41846026 41847675 wgEncodeRegDnaseClusteredV2 66 score:1000, srow:33198
25266 chr1 41846811 41847406 wgEncodeRegTfbsClusteredV3 ZNF263 score:416, expCount:1, expNums:368, expScores:416, srow:118241
25266 chr1 41846903 41847742 wgEncodeRegTfbsClusteredV3 EZH2 score:540, expCount:4, expNums:36,38,40,43, expScores:286,205,449,540, srow:118242
25266 chr1 41847298 41847313 tfbsConsSites V$GRE_C score:813, zScore:1.76, srow:98774
25266 chr1 41847300 41847311 tfbsConsSites V$MYOD_01 score:889, zScore:1.73, srow:98775
25266 chr1 41847323 41847338 tfbsConsSites V$AHRARNT_01 score:875, zScore:2.54, srow:98776
25266 chr1 41847387 41847405 tfbsConsSites V$AHRARNT_02 score:781, zScore:1.86, srow:98777
25266 chr1 41847396 41847417 tfbsConsSites V$OLF1_01 score:808, zScore:1.9, srow:98778
25266 chr1 41847401 41847412 tfbsConsSites V$AP2_Q6 score:908, zScore:2.17, srow:98779
25266 chr1 41847403 41847430 tfbsConsSites V$PAX5_02 score:761, zScore:1.65, srow:98780
25266 chr1 41847434 41847447 tfbsConsSites V$COUP_01 score:858, zScore:1.95, srow:98781
25266 chr1 41847451 41847463 tfbsConsSites V$RORA1_01 score:869, zScore:1.73, srow:98782
25266 chr1 41847472 41847493 tfbsConsSites V$HEN1_02 score:780, zScore:2.09, srow:98783
25266 chr1 41847503 41847516 tfbsConsSites V$ATF_01 score:839, zScore:1.95, srow:98784
25266 chr1 41847505 41847519 tfbsConsSites V$TAXCREB_01 score:787, zScore:1.88, srow:98785
25266 chr1 41847507 41847525 tfbsConsSites V$SEF1_C score:810, zScore:3.44, srow:98786
25266 chr1 41847520 41847547 tfbsConsSites V$PAX5_02 score:764, zScore:1.7, srow:98787
25266 chr1 41847550 41847569 tfbsConsSites V$MYCMAX_03 score:783, zScore:1.73, srow:98788
25266 chr1 41847409 41847409 cosmic COSM1602396 srow:27364
25266 chr1 41847271 41847275 phastConsElements100way lod=14 score:255, srow:181031
25266 chr1 41847284 41847310 phastConsElements100way lod=314 score:563, srow:181032
25266 chr1 41847312 41847319 phastConsElements100way lod=76 score:422, srow:181033
25266 chr1 41847321 41847322 phastConsElements100way lod=18 score:280, srow:181034
25266 chr1 41847324 41847331 phastConsElements100way lod=58 score:395, srow:181035
25266 chr1 41847333 41847340 phastConsElements100way lod=108 score:457, srow:181036
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Omics Overlaps

Dmrid Omic Set Data Plot
25266 cellmeth_recounts PrEC: 57, LNCaP: 1725, DU145: 3
25266 cellmeth_diffreps_PrECvsLNCaP A=614, B=5471, Length=2940, Event=Up, log2FC=3.16, padj=0
25266 cellmeth_diffreps_PrECvsDU145 A=198, B=2, Length=1280, Event=Down, log2FC=-6.63, padj=0
25266 cellmeth_diffreps_LNCaPvsDU145 A=5848.75, B=12.16, Length=2980, Event=Down, log2FC=-8.91, padj=0
25266 cellexp id=ENSG00000204060, name=FOXO6, PrEC=5, str=2, LNCaP=183, str=62, DU145=95, str=23
25266 tcgameth site:cg00596048, B=0.18, L=0.55, H=0.46
25266 tcgameth site:cg06359703, B=0.16, L=0.62, H=0.52
25266 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305