DMR 25296 chr1:45453051-45453200 (150bp)

DMR Stats
Positionchr1:45453051-45453200 (View on UCSC)
Width150bp
Genomic Contextpromoter
Nearest GenesEIF2B3 (656bp away)
ANODEV p-value0.0278021791389
FrequenciesBenign: 2.0 (28.57%), Low: 6.0 (100.0%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
25296 chr1 45452674 45453097 wgEncodeRegTfbsClusteredV3 RPC155 score:109, expCount:1, expNums:531, expScores:109, srow:129349
25296 chr1 45452832 45453207 wgEncodeRegTfbsClusteredV3 TBP score:137, expCount:1, expNums:545, expScores:137, srow:129350
25296 chr1 45452894 45453169 wgEncodeRegTfbsClusteredV3 ELF1 score:134, expCount:1, expNums:217, expScores:134, srow:129351
25296 chr1 45452955 45453198 wgEncodeRegTfbsClusteredV3 EGR1 score:306, expCount:1, expNums:216, expScores:306, srow:129352
25296 chr1 45452445 45454444 cpgShore — values(x.gr)[overs$srow, ]:1889
  • 5 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
25296 cellmeth_recounts PrEC: 12, LNCaP: 11, DU145: 15
25296 cellmeth_diffreps_PrECvsDU145 A=24, B=4, Length=220, Event=Down, log2FC=-2.58, padj=0.00252994212801597
25296 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305