DMR 25460 chr1:91185051-91185850 (800bp)

DMR Stats
Positionchr1:91185051-91185850 (View on UCSC)
Width800bp
Genomic Contextintergenic
Nearest GenesBARHL2 (2256bp away)
ANODEV p-value0.00418854085896
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
25460 chr1 91184706 91185655 wgEncodeRegDnaseClusteredV2 39 score:820, srow:54685
25460 chr1 91185666 91185835 wgEncodeRegDnaseClusteredV2 5 score:271, srow:54686
25460 chr1 91181601 91186065 wgEncodeRegTfbsClusteredV3 EZH2 score:1000, expCount:10, expNums:6,15,17,19,21,25,36,38,40,43, expScores:517,605,160,96,368,218,233,263,223,383, srow:189674
25460 chr1 91184910 91185525 wgEncodeRegTfbsClusteredV3 CHD1 score:480, expCount:1, expNums:4, expScores:480, srow:189690
25460 chr1 91184937 91185934 wgEncodeRegTfbsClusteredV3 CTBP2 score:323, expCount:1, expNums:348, expScores:142, srow:189691
25460 chr1 91185035 91186043 wgEncodeRegTfbsClusteredV3 SUZ12 score:285, expCount:2, expNums:358,578, expScores:167,149, srow:189692
25460 chr1 91185303 91185578 wgEncodeRegTfbsClusteredV3 EGR1 score:130, expCount:1, expNums:138, expScores:130, srow:189693
25460 chr1 91185115 91185123 tfbsConsSites V$AREB6_04 score:952, zScore:1.71, srow:218780
25460 chr1 91185132 91185144 tfbsConsSites V$IRF1_01 score:808, zScore:1.69, srow:218781
25460 chr1 91185415 91185422 tfbsConsSites V$E2F_02 score:954, zScore:2.94, srow:218782
25460 chr1 91185424 91185443 tfbsConsSites V$PPARA_01 score:737, zScore:1.7, srow:218783
25460 chr1 91185688 91185702 tfbsConsSites V$CDP_02 score:926, zScore:3.58, srow:218784
25460 chr1 91185053 91185066 phastConsElements100way lod=27 score:320, srow:385507
25460 chr1 91185160 91185164 phastConsElements100way lod=16 score:268, srow:385508
25460 chr1 91185273 91185274 phastConsElements100way lod=13 score:247, srow:385509
25460 chr1 91185699 91185706 phastConsElements100way lod=14 score:255, srow:385510
25460 chr1 91185715 91185724 phastConsElements100way lod=18 score:280, srow:385511
25460 chr1 91185827 91185842 phastConsElements100way lod=34 score:343, srow:385512
25460 chr1 91185157 91185577 cpgIsland CpG: 36 length:421, cpgNum:36, gcNum:263, perCpg:17.1, perGc:62.5, obsExp:0.94, srow:1311
25460 chr1 91184541 91185156 cpgShore — values(x.gr)[overs$srow, ]:2398
25460 chr1 91185578 91189139 cpgShore — values(x.gr)[overs$srow, ]:2399
  • 21 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
25460 cellmeth_recounts PrEC: 3, LNCaP: 1159, DU145: 27
25460 cellmeth_diffreps_PrECvsLNCaP A=22, B=4278, Length=3980, Event=Up, log2FC=7.6, padj=0
25460 cellmeth_diffreps_LNCaPvsDU145 A=4572.31, B=72.96, Length=3900, Event=Down, log2FC=-5.97, padj=0
25460 tcgameth site:cg00088183, B=0.22, L=0.54, H=0.49
25460 tcgameth site:cg13361185, B=0.23, L=0.46, H=0.44
25460 tcgameth site:cg14696458, B=0.3, L=0.57, H=0.52
25460 tcgameth site:cg14795752, B=0.15, L=0.4, H=0.35
25460 tcgameth site:cg22507154, B=0.44, L=0.73, H=0.73
25460 tcgameth site:cg24884703, B=0.09, L=0.46, H=0.46
25460 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305