DMR 25665 chr1:157948901-157949100 (200bp)

DMR Stats
Positionchr1:157948901-157949100 (View on UCSC)
Width200bp
Genomic Contextintergenic
Nearest GenesKIRREL (13962bp away)
ANODEV p-value0.00825131496108
FrequenciesBenign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
25665 chr1 157948346 157949235 wgEncodeRegDnaseClusteredV2 30 score:921, srow:74870
25665 chr1 157948749 157949238 wgEncodeRegTfbsClusteredV3 TAF1 score:151, expCount:1, expNums:157, expScores:151, srow:272934
25665 chr1 157948800 157949204 wgEncodeRegTfbsClusteredV3 CTCF score:504, expCount:21, expNums:5,137,597,609,635,636,639,646,657,658,659,661,662,664,669,673,675,676,677,678,686, expScores:247,258,263,221,146,146,134,163,154,167,324,192,504,109,162,185,149,144,160,144,280, srow:272935
25665 chr1 157948800 157949175 wgEncodeRegTfbsClusteredV3 TBP score:175, expCount:1, expNums:359, expScores:175, srow:272936
25665 chr1 157948900 157949143 wgEncodeRegTfbsClusteredV3 RAD21 score:381, expCount:2, expNums:149,355, expScores:381,176, srow:272937
25665 chr1 157948721 157949053 cpgIsland CpG: 28 length:333, cpgNum:28, gcNum:230, perCpg:16.8, perGc:69.1, obsExp:0.72, srow:1821
25665 chr1 157949054 157951053 cpgShore — values(x.gr)[overs$srow, ]:3336
  • 7 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
25665 cellmeth_recounts PrEC: 1, LNCaP: 1, DU145: 17
25665 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305