DMR 25683 chr1:163442251-163442450 (200bp)

DMR Stats
Positionchr1:163442251-163442450 (View on UCSC)
Width200bp
Genomic Contextintergenic
Nearest Genes5S_rRNA (3855bp away)
ANODEV p-value0.00879040139093
FrequenciesBenign: 0.0 (0.0%), Low: 3.0 (50.0%), High: 3.0 (33.33 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
25683 chr1 163442161 163442375 wgEncodeRegDnaseClusteredV2 8 score:1000, srow:77994
25683 chr1 163442249 163442254 tfbsConsSites V$AML1_01 score:1000, zScore:1.78, srow:333933
25683 chr1 163442283 163442301 tfbsConsSites V$SEF1_C score:737, zScore:2.01, srow:333934
25683 chr1 163442284 163442297 tfbsConsSites V$ROAZ_01 score:741, zScore:1.67, srow:333935
25683 chr1 163442285 163442299 tfbsConsSites V$CDPCR3_01 score:802, zScore:1.99, srow:333936
25683 chr1 163442299 163442313 tfbsConsSites V$HNF1_01 score:801, zScore:1.72, srow:333937
25683 chr1 163442301 163442316 tfbsConsSites V$FREAC3_01 score:812, zScore:1.91, srow:333938
25683 chr1 163442325 163442338 tfbsConsSites V$GATA1_03 score:888, zScore:2.51, srow:333939
25683 chr1 163442327 163442336 tfbsConsSites V$GATA6_01 score:965, zScore:1.67, srow:333940
25683 chr1 163442356 163442370 tfbsConsSites V$TAXCREB_01 score:794, zScore:2.01, srow:333941
25683 chr1 163442372 163442385 tfbsConsSites V$CEBP_Q2 score:881, zScore:1.69, srow:333942
25683 chr1 163442402 163442414 tfbsConsSites V$CHOP_01 score:840, zScore:1.93, srow:333943
25683 chr1 163442427 163442450 tfbsConsSites V$BRACH_01 score:690, zScore:1.9, srow:333944
25683 chr1 163441942 163442842 vistaEnhancers element_762 score:900, srow:81
25683 chr1 163442115 163442698 phastConsElements100way lod=6357 score:860, srow:588025
  • 15 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
25683 cellmeth_recounts PrEC: 1, LNCaP: 0, DU145: 0
25683 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305