DMR 25735 chr1:180325651-180325850 (200bp)
| DMR Stats | |
|---|---|
| Position | chr1:180325651-180325850 (View on UCSC) |
| Width | 200bp |
| Genomic Context | intron |
| Nearest Genes | ACBD6 (0bp away) |
| ANODEV p-value | 0.00150350823066 |
| Frequencies | Benign: 1.0 (14.29%), Low: 6.0 (100.0%), High: 9.0 (100.0 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25735 | ACBD6 | 2244 | uc001gog.3 | chr1 | 180257352 | 180472022 | - | 200 | 100.0 | 0.14 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (100), E7 (0), I7 (0), E8 (0) | 0.0 |
- 1 genes
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 25735 | chr1 | 180325643 | 180325671 | phastConsElements100way | lod=56 | score:392, srow:648678 |
- 1 features
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 25735 | cellmeth_recounts | PrEC: 1, LNCaP: 3, DU145: 3 |  |
| 25735 | cellexp | id=ENSG00000135847, name=ACBD6, PrEC=3449, str=1610, LNCaP=1840, str=1615, DU145=1805, str=2298 |  |
| 25735 | tcgaexp | gene=ACBD6, entrez=84320, pos=chr1:180257352-180472022(-), B=989, L=1035, M=1046, H=1078 |  |
| 25735 | tcgaexp | gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305 |  |