DMR 258 chr1:46932251-46932400 (150bp)

DMR Stats
Positionchr1:46932251-46932400 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesLOC729041 (20876bp away)
ANODEV p-value0.00755464699467
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 1.0 (11.11 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
258 chr1 46932046 46932895 wgEncodeRegDnaseClusteredV2 61 score:1000, srow:37010
258 chr1 46931399 46933190 wgEncodeRegTfbsClusteredV3 EZH2 score:706, expCount:9, expNums:1,6,13,15,21,36,38,40,43, expScores:259,267,471,250,324,232,500,272,277, srow:133880
258 chr1 46932018 46932687 wgEncodeRegTfbsClusteredV3 RBBP5 score:173, expCount:1, expNums:8, expScores:173, srow:133881
258 chr1 46932099 46932698 wgEncodeRegTfbsClusteredV3 CTBP2 score:223, expCount:1, expNums:348, expScores:223, srow:133882
258 chr1 46932152 46932781 wgEncodeRegTfbsClusteredV3 TCF7L2 score:890, expCount:2, expNums:363,581, expScores:652,331, srow:133883
258 chr1 46932334 46932609 wgEncodeRegTfbsClusteredV3 EGR1 score:138, expCount:1, expNums:138, expScores:138, srow:133884
258 chr1 46932398 46933207 wgEncodeRegTfbsClusteredV3 SUZ12 score:123, expCount:1, expNums:578, expScores:123, srow:133885
258 chr1 46932241 46932257 tfbsConsSites V$PPARG_03 score:778, zScore:1.75, srow:114493
258 chr1 46932245 46932256 tfbsConsSites V$IK2_01 score:939, zScore:1.82, srow:114494
258 chr1 46932248 46932268 tfbsConsSites V$STAT1_01 score:772, zScore:1.94, srow:114495
258 chr1 46932265 46932279 tfbsConsSites V$PBX1_02 score:851, zScore:2.65, srow:114496
258 chr1 46932266 46932280 tfbsConsSites V$CDP_02 score:840, zScore:2.13, srow:114497
258 chr1 46932267 46932283 tfbsConsSites V$HNF1_C score:804, zScore:1.87, srow:114498
258 chr1 46932268 46932283 tfbsConsSites V$S8_01 score:849, zScore:1.67, srow:114499
258 chr1 46932271 46932283 tfbsConsSites V$NKX61_01 score:831, zScore:1.75, srow:114500
258 chr1 46932274 46932281 tfbsConsSites V$NKX25_02 score:978, zScore:2.85, srow:114501
258 chr1 46932285 46932294 tfbsConsSites V$HSF2_01 score:921, zScore:1.8, srow:114502
258 chr1 46932318 46932327 tfbsConsSites V$CDPCR1_01 score:896, zScore:2.84, srow:114503
258 chr1 46932322 46932340 tfbsConsSites V$PAX2_01 score:772, zScore:1.74, srow:114504
258 chr1 46932343 46932361 tfbsConsSites V$ER_Q6 score:778, zScore:1.69, srow:114505
258 chr1 46932361 46932369 tfbsConsSites V$MSX1_01 score:922, zScore:2.21, srow:114506
258 chr1 46932377 46932395 tfbsConsSites V$AHRARNT_02 score:836, zScore:2.88, srow:114507
258 chr1 46932379 46932406 tfbsConsSites V$PAX5_01 score:760, zScore:1.65, srow:114508
258 chr1 46932393 46932410 tfbsConsSites V$CMYB_01 score:818, zScore:2.2, srow:114509
258 chr1 46932184 46932539 phastConsElements100way lod=1911 score:741, srow:207886
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Omics Overlaps

Dmrid Omic Set Data Plot
258 cellmeth_recounts PrEC: 6, LNCaP: 406, DU145: 3
258 cellmeth_diffreps_PrECvsLNCaP A=61, B=1901, Length=1520, Event=Up, log2FC=4.96, padj=0
258 cellmeth_diffreps_LNCaPvsDU145 A=2032.25, B=6.55, Length=1520, Event=Down, log2FC=-8.28, padj=0
258 cellexp id=ENSG00000225667, name=LINC00505, PrEC=0, str=2, LNCaP=0, str=0, DU145=3, str=11
258 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305