DMR 25819 chr1:217312801-217313400 (600bp)

DMR Stats
Positionchr1:217312801-217313400 (View on UCSC)
Width600bp
Genomic Contextintergenic
Nearest GenesESRRG (1703bp away)
ANODEV p-value2.97368654414e-06
FrequenciesBenign: 0.0 (0.0%), Low: 6.0 (100.0%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
25819 chr1 217312126 217312835 wgEncodeRegDnaseClusteredV2 20 score:300, srow:103321
25819 chr1 217312986 217313230 wgEncodeRegDnaseClusteredV2 9 score:318, srow:103322
25819 chr1 217313326 217313935 wgEncodeRegDnaseClusteredV2 20 score:882, srow:103323
25819 chr1 217311458 217313176 wgEncodeRegTfbsClusteredV3 EZH2 score:448, expCount:4, expNums:6,15,36,40, expScores:448,320,221,209, srow:380295
25819 chr1 217312339 217313148 wgEncodeRegTfbsClusteredV3 SUZ12 score:196, expCount:2, expNums:358,578, expScores:90,196, srow:380297
25819 chr1 217312788 217312801 tfbsConsSites V$ROAZ_01 score:749, zScore:1.8, srow:455459
25819 chr1 217312876 217312883 tfbsConsSites V$TBP_01 score:966, zScore:1.66, srow:455460
25819 chr1 217312965 217312977 tfbsConsSites V$OCT_C score:818, zScore:1.94, srow:455461
25819 chr1 217312979 217312994 tfbsConsSites V$S8_01 score:849, zScore:1.67, srow:455462
25819 chr1 217312980 217312993 tfbsConsSites V$CHX10_01 score:828, zScore:2.13, srow:455463
25819 chr1 217312983 217312993 tfbsConsSites V$PAX4_02 score:935, zScore:2.75, srow:455464
25819 chr1 217313060 217313077 tfbsConsSites V$AP4_01 score:811, zScore:1.66, srow:455465
25819 chr1 217313094 217313105 tfbsConsSites V$CREB_Q2 score:845, zScore:1.68, srow:455466
25819 chr1 217313095 217313105 tfbsConsSites V$AP1FJ_Q2 score:933, zScore:2.16, srow:455467
25819 chr1 217313096 217313114 tfbsConsSites V$ER_Q6 score:808, zScore:2.21, srow:455468
25819 chr1 217313146 217313157 tfbsConsSites V$PAX4_03 score:939, zScore:2.23, srow:455469
25819 chr1 217313197 217313211 tfbsConsSites V$CDP_02 score:825, zScore:1.87, srow:455470
25819 chr1 217313283 217313296 tfbsConsSites V$OCT1_06 score:884, zScore:2.12, srow:455471
25819 chr1 217313353 217313364 tfbsConsSites V$PAX4_03 score:915, zScore:1.82, srow:455472
25819 chr1 217313358 217313373 tfbsConsSites V$MEF2_01 score:764, zScore:1.86, srow:455473
25819 chr1 217312886 217312888 phastConsElements100way lod=12 score:240, srow:778053
25819 chr1 217312969 217312976 phastConsElements100way lod=19 score:285, srow:778054
25819 chr1 217312984 217312993 phastConsElements100way lod=58 score:395, srow:778055
25819 chr1 217313003 217313016 phastConsElements100way lod=70 score:414, srow:778056
25819 chr1 217313022 217313028 phastConsElements100way lod=38 score:354, srow:778057
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Omics Overlaps

Dmrid Omic Set Data Plot
25819 cellmeth_recounts PrEC: 23, LNCaP: 374, DU145: 35
25819 cellmeth_diffreps_PrECvsLNCaP A=81, B=400, Length=1080, Event=Up, log2FC=2.3, padj=0
25819 cellmeth_diffreps_PrECvsDU145 A=48, B=8, Length=400, Event=Down, log2FC=-2.58, padj=1.5081385297093e-06
25819 cellmeth_diffreps_LNCaPvsDU145 A=467.17, B=37.42, Length=1520, Event=Down, log2FC=-3.64, padj=0