DMR 25857 chr1:226613201-226613400 (200bp)

DMR Stats
Positionchr1:226613201-226613400 (View on UCSC)
Width200bp
Genomic Contextintergenic
Nearest GenesPARP1 (17399bp away)
ANODEV p-value0.00182531397313
FrequenciesBenign: 1.0 (14.29%), Low: 5.0 (83.33%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
25857 chr1 226612801 226613295 wgEncodeRegDnaseClusteredV2 14 score:316, srow:107875
25857 chr1 226613341 226613730 wgEncodeRegDnaseClusteredV2 15 score:663, srow:107876
25857 chr1 226612959 226613478 wgEncodeRegTfbsClusteredV3 ATF2 score:251, expCount:1, expNums:79, expScores:251, srow:397724
25857 chr1 226613004 226613293 wgEncodeRegTfbsClusteredV3 MEF2A score:137, expCount:1, expNums:93, expScores:137, srow:397725
25857 chr1 226613057 226613292 wgEncodeRegTfbsClusteredV3 BATF score:282, expCount:1, expNums:81, expScores:282, srow:397726
25857 chr1 226613261 226613830 wgEncodeRegTfbsClusteredV3 POLR2A score:386, expCount:4, expNums:105,306,326,622, expScores:343,316,386,218, srow:397727
25857 chr1 226613312 226613573 wgEncodeRegTfbsClusteredV3 RUNX3 score:982, expCount:1, expNums:109, expScores:982, srow:397728
  • 7 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
25857 cellmeth_recounts PrEC: 9, LNCaP: 5, DU145: 17
25857 cellmeth_diffreps_PrECvsLNCaP A=14, B=0, Length=280, Event=Down, log2FC=-Inf, padj=0.000432533284720616
25857 cellmeth_diffreps_LNCaPvsDU145 A=0, B=13.1, Length=240, Event=Up, log2FC=Inf, padj=0.00251303816158297