DMR 25939 chr1:246568901-246569050 (150bp)

DMR Stats
Positionchr1:246568901-246569050 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesSMYD3 (0bp away)
ANODEV p-value0.0129409765956
FrequenciesBenign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
25939 SMYD3 2800 uc001ibk.3 chr1 245912642 246580714 - 150 100.0 0.01 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0) 0.0
25939 SMYD3 2800 uc001ibl.3 chr1 245912642 246670644 - 150 100.0 0.01 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
25939 chr1 246568908 246568910 phastConsElements100way lod=13 score:247, srow:859824
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
25939 cellmeth_recounts PrEC: 2, LNCaP: 3, DU145: 1
25939 cellexp id=ENSG00000185420, name=SMYD3, PrEC=966, str=835, LNCaP=1617, str=1364, DU145=1824, str=1808
25939 tcgaexp gene=SMYD3, entrez=64754, pos=chr1:245912642-246670644(-), B=482, L=721, M=760, H=812