DMR 25955 chr2:568051-568300 (250bp)

DMR Stats
Positionchr2:568051-568300 (View on UCSC)
Width250bp
Genomic Contextintergenic
Nearest GenesTMEM18 (99672bp away)
ANODEV p-value0.00106435241795
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
25955 chr2 567886 568130 wgEncodeRegDnaseClusteredV2 13 score:565, srow:593181
25955 chr2 568161 568675 wgEncodeRegDnaseClusteredV2 54 score:1000, srow:593182
25955 chr2 567672 568081 wgEncodeRegTfbsClusteredV3 GATA2 score:484, expCount:1, expNums:586, expScores:484, srow:2088280
25955 chr2 567695 568164 wgEncodeRegTfbsClusteredV3 GATA3 score:282, expCount:2, expNums:272,571, expScores:240,282, srow:2088281
25955 chr2 567762 568437 wgEncodeRegTfbsClusteredV3 KAP1 score:479, expCount:1, expNums:365, expScores:479, srow:2088282
25955 chr2 567770 568520 wgEncodeRegTfbsClusteredV3 STAT1 score:623, expCount:1, expNums:410, expScores:181, srow:2088283
25955 chr2 567782 568635 wgEncodeRegTfbsClusteredV3 SMARCC1 score:295, expCount:1, expNums:371, expScores:217, srow:2088284
25955 chr2 567792 568452 wgEncodeRegTfbsClusteredV3 MYC score:457, expCount:4, expNums:382,560,561,611, expScores:327,457,211,281, srow:2088285
25955 chr2 567824 568188 wgEncodeRegTfbsClusteredV3 TFAP2C score:1000, expCount:1, expNums:370, expScores:1000, srow:2088286
25955 chr2 567826 568505 wgEncodeRegTfbsClusteredV3 SMARCA4 score:167, expCount:1, expNums:377, expScores:167, srow:2088287
25955 chr2 567827 568381 wgEncodeRegTfbsClusteredV3 FOS score:488, expCount:5, expNums:379,556,557,558,559, expScores:127,243,320,169,485, srow:2088288
25955 chr2 567830 568479 wgEncodeRegTfbsClusteredV3 TFAP2A score:657, expCount:1, expNums:369, expScores:345, srow:2088289
25955 chr2 567839 568267 wgEncodeRegTfbsClusteredV3 STAT3 score:995, expCount:6, expNums:411,565,566,567,568,569, expScores:143,233,462,444,437,995, srow:2088290
25955 chr2 567841 568544 wgEncodeRegTfbsClusteredV3 TCF7L2 score:694, expCount:1, expNums:414, expScores:383, srow:2088291
25955 chr2 567847 568222 wgEncodeRegTfbsClusteredV3 TBP score:200, expCount:1, expNums:412, expScores:200, srow:2088292
25955 chr2 567885 568214 wgEncodeRegTfbsClusteredV3 EP300 score:289, expCount:1, expNums:401, expScores:289, srow:2088293
25955 chr2 567900 568559 wgEncodeRegTfbsClusteredV3 SMARCB1 score:199, expCount:1, expNums:391, expScores:199, srow:2088294
25955 chr2 567904 568207 wgEncodeRegTfbsClusteredV3 BRCA1 score:178, expCount:1, expNums:374, expScores:178, srow:2088295
25955 chr2 567914 568253 wgEncodeRegTfbsClusteredV3 JUN score:144, expCount:1, expNums:381, expScores:144, srow:2088296
25955 chr2 567922 568605 wgEncodeRegTfbsClusteredV3 POLR2A score:791, expCount:5, expNums:168,402,563,564,613, expScores:726,368,215,351,282, srow:2088297
25955 chr2 567928 568175 wgEncodeRegTfbsClusteredV3 CEBPB score:1000, expCount:1, expNums:378, expScores:1000, srow:2088298
25955 chr2 567964 568359 wgEncodeRegTfbsClusteredV3 MAX score:402, expCount:1, expNums:395, expScores:402, srow:2088299
25955 chr2 567993 568312 wgEncodeRegTfbsClusteredV3 JUND score:194, expCount:1, expNums:393, expScores:194, srow:2088300
25955 chr2 568071 568526 wgEncodeRegTfbsClusteredV3 GTF2F1 score:247, expCount:1, expNums:389, expScores:247, srow:2088301
25955 chr2 568110 568479 wgEncodeRegTfbsClusteredV3 CHD2 score:229, expCount:1, expNums:380, expScores:229, srow:2088302
  • Page 1 of 2
  • 25 of 29 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
25955 cellmeth_recounts PrEC: 0, LNCaP: 4, DU145: 1
25955 cellexp id=ENSG00000233633, name=AC093326.3, PrEC=0, str=0, LNCaP=0, str=0, DU145=0, str=0
25955 tcgameth site:cg16711011, B=0.48, L=0.75, H=0.75