DMR 26230 chr2:64836701-64836850 (150bp)

DMR Stats
Positionchr2:64836701-64836850 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesLOC339807 (0bp away)
ANODEV p-value0.0278611954699
FrequenciesBenign: 1.0 (14.29%), Low: 4.0 (66.67%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
26230 LOC339807 16420 uc002sdd.3 chr2 64834446 64843616 + 150 100.0 0.35 1 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
26230 chr2 64836021 64837195 wgEncodeRegDnaseClusteredV2 93 score:1000, srow:624821
26230 chr2 64836043 64836725 wgEncodeRegTfbsClusteredV3 E2F6 score:577, expCount:2, expNums:215,495, expScores:577,182, srow:2194710
26230 chr2 64836130 64837132 wgEncodeRegTfbsClusteredV3 POLR2A score:1000, expCount:30, expNums:61,62,78,105,123,131,147,192,228,229,283,306,328,330,332,334,336,338,340,520,521,522,523,525,583,585,596,622,632,633, expScores:1000,1000,249,808,263,652,297,337,241,1000,151,371,738,508,638,212,684,801,420,223,310,315,407,454,504,174,692,394,324,355, srow:2194712
26230 chr2 64836208 64837070 wgEncodeRegTfbsClusteredV3 PHF8 score:1000, expCount:1, expNums:30, expScores:1000, srow:2194713
26230 chr2 64836223 64836798 wgEncodeRegTfbsClusteredV3 KDM5B score:224, expCount:1, expNums:31, expScores:224, srow:2194714
26230 chr2 64836320 64836755 wgEncodeRegTfbsClusteredV3 MXI1 score:200, expCount:1, expNums:298, expScores:200, srow:2194715
26230 chr2 64836322 64836817 wgEncodeRegTfbsClusteredV3 HMGN3 score:204, expCount:1, expNums:501, expScores:204, srow:2194716
26230 chr2 64836342 64836742 wgEncodeRegTfbsClusteredV3 PAX5 score:238, expCount:3, expNums:100,101,129, expScores:195,154,238, srow:2194717
26230 chr2 64836345 64836711 wgEncodeRegTfbsClusteredV3 MAX score:327, expCount:2, expNums:223,511, expScores:327,179, srow:2194718
26230 chr2 64836348 64836787 wgEncodeRegTfbsClusteredV3 MYC score:290, expCount:2, expNums:489,624, expScores:279,290, srow:2194719
26230 chr2 64836363 64836902 wgEncodeRegTfbsClusteredV3 GABPA score:926, expCount:5, expNums:54,91,140,180,220, expScores:288,221,219,721,926, srow:2194720
26230 chr2 64836367 64836822 wgEncodeRegTfbsClusteredV3 CCNT2 score:308, expCount:1, expNums:476, expScores:308, srow:2194721
26230 chr2 64836373 64837190 wgEncodeRegTfbsClusteredV3 CTCF score:1000, expCount:61, expNums:2,5,12,14,16,18,20,24,39,42,44,48,49,137,174,213,290,463,493,595,597,598,601,603,604,605,606,607,609,618,621,627,628,629,630,631,635,636,638,639,642,643,644,650,651,652,653,654,655,656,659,667,671,672,673,674,676,677,678,683,686, expScores:269,520,130,163,155,111,488,123,139,349,156,659,485,768,640,568,1000,502,559,1000,874,954,498,980,1000,1000,652,1000,441,119,695,565,1000,1000,1000,1000,667,467,225,210,171,140,196,363,790,456,512,472,778,198,123,192,302,152,163,137,115,144,106,137,202, srow:2194722
26230 chr2 64836400 64836870 wgEncodeRegTfbsClusteredV3 UBTF score:281, expCount:2, expNums:548,549, expScores:214,281, srow:2194723
26230 chr2 64836429 64836848 wgEncodeRegTfbsClusteredV3 TAF1 score:301, expCount:6, expNums:115,127,132,157,199,238, expScores:267,134,121,223,301,146, srow:2194724
26230 chr2 64836435 64836758 wgEncodeRegTfbsClusteredV3 YY1 score:311, expCount:5, expNums:119,128,133,244,245, expScores:288,169,257,212,311, srow:2194725
26230 chr2 64836438 64836751 wgEncodeRegTfbsClusteredV3 ZNF143 score:413, expCount:2, expNums:322,552, expScores:413,284, srow:2194726
26230 chr2 64836451 64836785 wgEncodeRegTfbsClusteredV3 ELF1 score:1000, expCount:3, expNums:88,175,217, expScores:1000,474,1000, srow:2194728
26230 chr2 64836451 64836931 wgEncodeRegTfbsClusteredV3 MAZ score:325, expCount:2, expNums:297,512, expScores:191,325, srow:2194729
26230 chr2 64836453 64836748 wgEncodeRegTfbsClusteredV3 RCOR1 score:182, expCount:1, expNums:492, expScores:182, srow:2194730
26230 chr2 64836456 64836735 wgEncodeRegTfbsClusteredV3 CREB1 score:187, expCount:1, expNums:47, expScores:187, srow:2194731
26230 chr2 64836467 64836710 wgEncodeRegTfbsClusteredV3 JUN score:130, expCount:1, expNums:480, expScores:130, srow:2194732
26230 chr2 64836469 64836728 wgEncodeRegTfbsClusteredV3 TCF12 score:164, expCount:1, expNums:116, expScores:164, srow:2194733
26230 chr2 64836473 64836848 wgEncodeRegTfbsClusteredV3 TBP score:258, expCount:1, expNums:545, expScores:258, srow:2194734
26230 chr2 64836481 64836844 wgEncodeRegTfbsClusteredV3 ELK1 score:225, expCount:1, expNums:293, expScores:225, srow:2194735
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  • 25 of 34 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
26230 cellmeth_recounts PrEC: 17, LNCaP: 352, DU145: 6
26230 cellmeth_diffreps_PrECvsLNCaP A=128, B=1207, Length=1200, Event=Up, log2FC=3.24, padj=0
26230 cellmeth_diffreps_PrECvsDU145 A=128, B=7, Length=1040, Event=Down, log2FC=-4.19, padj=0
26230 cellmeth_diffreps_LNCaPvsDU145 A=1290.34, B=7.48, Length=1220, Event=Down, log2FC=-7.43, padj=0
26230 cellexp id=ENSG00000233694, name=AC007365.1, PrEC=0, str=0, LNCaP=0, str=0, DU145=1, str=1
26230 tcgameth site:cg27470373, B=0.47, L=0.65, H=0.63