DMR 26287 chr2:74375401-74375650 (250bp)

DMR Stats
Positionchr2:74375401-74375650 (View on UCSC)
Width250bp
Genomic Contextpromoter
Nearest GenesBOLA3-AS1 (0bp away)
ANODEV p-value1.87223150871e-08
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
26287 BOLA3-AS1 16527 uc002ske.3 chr2 74375108 74379516 + 250 100.0 0.05 1 82.8 E1 (0), I1 (30.4), E2 (51.6), I2 (18.4), E3 (0) 0.0
26287 BOLA3-AS1 16527 uc002skf.3 chr2 74375108 74376181 + 250 100.0 0.04 1 82.8 E1 (82), I1 (18.4), E2 (0) 100.0
26287 BOLA3-AS1 16527 uc002skg.3 chr2 74375108 74379516 + 250 100.0 0.07 1 82.8 E1 (82), I1 (18.4), E2 (0) 0.0
  • 3 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
26287 chr2 74375306 74375915 wgEncodeRegDnaseClusteredV2 32 score:727, srow:630361
26287 chr2 74374464 74375619 wgEncodeRegTfbsClusteredV3 POLR2A score:1000, expCount:63, expNums:32,61,62,78,104,105,124,130,131,146,147,163,168,191,192,206,207,228,229,249,256,259,275,283,306,326,328,330,332,334,336,338,340,362,366,402,403,445,446,461,520,521,522,523,524,525,563,564,577,583,585,596,599,602,610,613,616,619,622,632,633,634,637, expScores:179,1000,1000,1000,474,1000,400,349,925,304,752,1000,1000,514,593,521,287,200,423,181,407,537,445,304,728,781,1000,1000,1000,749,1000,1000,1000,216,318,1000,241,137,216,155,287,223,266,234,189,987,430,424,569,644,1000,1000,756,322,128,303,286,446,457,1000,969,507,413, srow:2216706
26287 chr2 74374759 74375487 wgEncodeRegTfbsClusteredV3 TAF1 score:1000, expCount:10, expNums:65,115,127,132,157,169,199,238,254,261, expScores:210,406,215,242,452,241,1000,494,202,508, srow:2216718
26287 chr2 74374825 74375450 wgEncodeRegTfbsClusteredV3 MYC score:482, expCount:10, expNums:382,487,488,489,575,614,620,623,624,626, expScores:189,482,180,390,302,189,237,227,480,410, srow:2216736
26287 chr2 74374828 74375419 wgEncodeRegTfbsClusteredV3 TBP score:370, expCount:2, expNums:452,545, expScores:315,171, srow:2216737
26287 chr2 74374935 74375470 wgEncodeRegTfbsClusteredV3 SMARCB1 score:162, expCount:1, expNums:502, expScores:162, srow:2216762
26287 chr2 74374988 74375417 wgEncodeRegTfbsClusteredV3 E2F6 score:383, expCount:2, expNums:215,495, expScores:383,144, srow:2216773
26287 chr2 74375151 74375486 wgEncodeRegTfbsClusteredV3 SP1 score:159, expCount:1, expNums:196, expScores:159, srow:2216777
26287 chr2 74375156 74375751 wgEncodeRegTfbsClusteredV3 ZNF263 score:256, expCount:1, expNums:368, expScores:256, srow:2216778
26287 chr2 74375208 74375537 wgEncodeRegTfbsClusteredV3 PHF8 score:710, expCount:1, expNums:30, expScores:710, srow:2216779
26287 chr2 74375256 74375915 wgEncodeRegTfbsClusteredV3 MTA3 score:333, expCount:1, expNums:95, expScores:333, srow:2216780
26287 chr2 74375264 74375879 wgEncodeRegTfbsClusteredV3 MYBL2 score:262, expCount:1, expNums:186, expScores:262, srow:2216781
26287 chr2 74375357 74375812 wgEncodeRegTfbsClusteredV3 JUND score:257, expCount:1, expNums:594, expScores:257, srow:2216782
26287 chr2 74375367 74375622 wgEncodeRegTfbsClusteredV3 HDAC2 score:152, expCount:1, expNums:141, expScores:152, srow:2216783
26287 chr2 74375373 74375728 wgEncodeRegTfbsClusteredV3 TAF7 score:160, expCount:1, expNums:158, expScores:160, srow:2216784
26287 chr2 74375414 74375729 wgEncodeRegTfbsClusteredV3 CHD2 score:175, expCount:1, expNums:427, expScores:175, srow:2216785
26287 chr2 74375466 74376081 wgEncodeRegTfbsClusteredV3 CHD1 score:217, expCount:1, expNums:4, expScores:217, srow:2216786
26287 chr2 74375529 74376052 wgEncodeRegTfbsClusteredV3 HDAC1 score:227, expCount:1, expNums:26, expScores:227, srow:2216787
26287 chr2 74375615 74376154 wgEncodeRegTfbsClusteredV3 MYC score:201, expCount:2, expNums:488,489, expScores:130,201, srow:2216788
26287 chr2 74375454 74375457 phastConsElements100way lod=14 score:255, srow:4635236
26287 chr2 74375258 74377257 cpgShore — values(x.gr)[overs$srow, ]:27214
  • 21 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
26287 cellmeth_recounts PrEC: 0, LNCaP: 16, DU145: 5
26287 cellmeth_diffreps_PrECvsLNCaP A=0, B=13, Length=280, Event=Up, log2FC=Inf, padj=0.000827318446465587
26287 cellmeth_diffreps_LNCaPvsDU145 A=13.9, B=0, Length=200, Event=Down, log2FC=-Inf, padj=0.0015589380675887
26287 cellexp id=ENSG00000225439, name=BOLA3-AS1, PrEC=299, str=151, LNCaP=78, str=72, DU145=65, str=50
26287 tcgameth site:cg02051239, B=0.23, L=0.62, H=0.54