DMR 26329 chr2:95692051-95693200 (1150bp)

DMR Stats
Positionchr2:95692051-95693200 (View on UCSC)
Width1150bp
Genomic Contextintron
Nearest GenesMAL (0bp away)
ANODEV p-value8.13377143416e-12
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 0.0 (0.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
26329 MAL 16675 uc002stx.2 chr2 95691400 95719737 + 1150 100.0 0.1 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0) 0.0
26329 MAL 16675 uc002sty.2 chr2 95691400 95719737 + 1150 100.0 0.05 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0) 0.0
26329 MAL 16675 uc002stz.2 chr2 95691400 95719737 + 1150 100.0 0.05 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0) 0.0
26329 MAL 16675 uc002sua.2 chr2 95691400 95719737 + 1150 100.0 0.06 0 0.0 E1 (0), I1 (100), E2 (0) 0.0
  • 4 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
26329 chr2 95691641 95692135 wgEncodeRegDnaseClusteredV2 46 score:986, srow:635216
26329 chr2 95692226 95692475 wgEncodeRegDnaseClusteredV2 23 score:594, srow:635217
26329 chr2 95692646 95693415 wgEncodeRegDnaseClusteredV2 23 score:335, srow:635218
26329 chr2 95690420 95692330 wgEncodeRegTfbsClusteredV3 EZH2 score:594, expCount:8, expNums:1,17,19,21,36,38,40,43, expScores:550,223,100,594,224,192,209,265, srow:2235324
26329 chr2 95692185 95692508 wgEncodeRegTfbsClusteredV3 E2F6 score:210, expCount:1, expNums:215, expScores:210, srow:2235329
26329 chr2 95692292 95692607 wgEncodeRegTfbsClusteredV3 EBF1 score:434, expCount:1, expNums:292, expScores:434, srow:2235330
26329 chr2 95692587 95693244 wgEncodeRegTfbsClusteredV3 EZH2 score:349, expCount:2, expNums:19,40, expScores:103,349, srow:2235331
26329 chr2 95692076 95692099 tfbsConsSites V$GFI1_01 score:829, zScore:2.39, srow:2704034
26329 chr2 95692324 95692335 tfbsConsSites V$AREB6_03 score:944, zScore:2.77, srow:2704035
26329 chr2 95692324 95692335 tfbsConsSites V$LMO2COM_01 score:943, zScore:2.05, srow:2704036
26329 chr2 95692449 95692470 tfbsConsSites V$OLF1_01 score:830, zScore:2.27, srow:2704037
26329 chr2 95692848 95692856 tfbsConsSites V$PAX2_02 score:970, zScore:1.69, srow:2704038
26329 chr2 95692173 95692177 phastConsElements100way lod=13 score:247, srow:4679847
26329 chr2 95692299 95692310 phastConsElements100way lod=15 score:262, srow:4679848
26329 chr2 95690858 95692431 cpgIsland CpG: 116 length:1574, cpgNum:116, gcNum:900, perCpg:14.7, perGc:57.2, obsExp:0.9, srow:15241
26329 chr2 95692432 95694431 cpgShore — values(x.gr)[overs$srow, ]:27429
  • 16 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
26329 cellmeth_recounts PrEC: 3, LNCaP: 48, DU145: 19
26329 cellmeth_diffreps_PrECvsLNCaP A=0, B=12, Length=300, Event=Up, log2FC=Inf, padj=0.00157949948552458
26329 cellmeth_diffreps_PrECvsLNCaP A=0, B=21, Length=380, Event=Up, log2FC=Inf, padj=4.02459409075954e-06
26329 cellexp id=ENSG00000172005, name=MAL, PrEC=109, str=36, LNCaP=0, str=1, DU145=3, str=1
26329 cellexp id=ENSG00000233850, name=AC103563.8, PrEC=0, str=0, LNCaP=0, str=0, DU145=0, str=0
26329 tcgameth site:cg03129884, B=0.39, L=0.56, H=0.54
26329 tcgameth site:cg19762657, B=0.31, L=0.55, H=0.52
26329 tcgameth site:cg22762844, B=0.08, L=0.26, H=0.32
26329 tcgaexp gene=MAL, entrez=4118, pos=chr2:95691400-95719737(+), B=295, L=176, M=89, H=61