DMR 26405 chr2:111615901-111616050 (150bp)

DMR Stats
Positionchr2:111615901-111616050 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesACOXL (0bp away)
ANODEV p-value0.0118166174208
FrequenciesBenign: 1.0 (14.29%), Low: 5.0 (83.33%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
26405 ACOXL 16851 uc010yxk.1 chr2 111490150 111875799 + 150 100.0 0.27 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (100), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (0), E18 (0) 0.0
26405 ACOXL 16851 uc021vmm.1 chr2 111556591 111851921 + 150 100.0 0.36 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (100), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0) 0.0
26405 ACOXL 16851 uc021vmn.1 chr2 111556591 111851921 + 150 100.0 0.36 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (100), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0) 0.0
  • 3 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
26405 chr2 111615786 111616255 wgEncodeRegDnaseClusteredV2 30 score:1000, srow:643323
26405 chr2 111615716 111616311 wgEncodeRegTfbsClusteredV3 NFIC score:261, expCount:1, expNums:97, expScores:261, srow:2259266
26405 chr2 111615806 111616121 wgEncodeRegTfbsClusteredV3 EBF1 score:371, expCount:2, expNums:86,292, expScores:248,371, srow:2259267
26405 chr2 111615820 111616095 wgEncodeRegTfbsClusteredV3 SPI1 score:210, expCount:1, expNums:107, expScores:210, srow:2259268
26405 chr2 111615867 111616210 wgEncodeRegTfbsClusteredV3 PAX5 score:191, expCount:2, expNums:100,101, expScores:191,191, srow:2259269
26405 chr2 111615871 111616306 wgEncodeRegTfbsClusteredV3 MXI1 score:178, expCount:1, expNums:298, expScores:178, srow:2259270
26405 chr2 111615874 111616193 wgEncodeRegTfbsClusteredV3 POU2F2 score:380, expCount:1, expNums:106, expScores:380, srow:2259271
26405 chr2 111615900 111616471 wgEncodeRegTfbsClusteredV3 POLR2A score:379, expCount:4, expNums:104,130,131,338, expScores:379,324,308,180, srow:2259272
26405 chr2 111615914 111616283 wgEncodeRegTfbsClusteredV3 EP300 score:258, expCount:1, expNums:304, expScores:258, srow:2259273
26405 chr2 111615918 111616297 wgEncodeRegTfbsClusteredV3 TBP score:199, expCount:1, expNums:317, expScores:199, srow:2259274
26405 chr2 111615931 111616376 wgEncodeRegTfbsClusteredV3 RELA score:184, expCount:2, expNums:325,329, expScores:184,170, srow:2259275
26405 chr2 111615944 111616273 wgEncodeRegTfbsClusteredV3 BHLHE40 score:293, expCount:1, expNums:284, expScores:293, srow:2259276
26405 chr2 111615951 111616232 wgEncodeRegTfbsClusteredV3 RUNX3 score:825, expCount:1, expNums:109, expScores:825, srow:2259277
26405 chr2 111616025 111616179 wgEncodeRegTfbsClusteredV3 ATF2 score:435, expCount:1, expNums:79, expScores:435, srow:2259278
26405 chr2 111616011 111616040 tfbsConsSites V$PAX4_04 score:764, zScore:2.37, srow:2730456
26405 chr2 111616012 111616025 tfbsConsSites V$RREB1_01 score:821, zScore:1.89, srow:2730457
26405 chr2 111615941 111615945 phastConsElements100way lod=17 score:274, srow:4724402
26405 chr2 111615951 111615955 phastConsElements100way lod=21 score:295, srow:4724403
26405 chr2 111615975 111615977 phastConsElements100way lod=13 score:247, srow:4724404
26405 chr2 111615987 111616018 phastConsElements100way lod=136 score:480, srow:4724405
26405 chr2 111616023 111616070 phastConsElements100way lod=188 score:512, srow:4724406
  • 21 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
26405 cellmeth_recounts PrEC: 1, LNCaP: 1, DU145: 0
26405 cellexp id=ENSG00000153093, name=ACOXL, PrEC=2, str=5, LNCaP=81, str=81, DU145=140, str=290
26405 tcgaexp gene=ACOXL, entrez=55289, pos=chr2:111490150-111875799(+), B=168, L=194, M=182, H=157
26405 tcgaexp gene=RGPD5, entrez=84220, pos=chr2:110561556-113179689(+), B=246, L=163, M=204, H=232