DMR 26407 chr2:111875201-111876150 (950bp)

DMR Stats
Positionchr2:111875201-111876150 (View on UCSC)
Width950bp
Genomic Context3' end
Nearest GenesACOXL (0bp away)
ANODEV p-value0.000651966405815
FrequenciesBenign: 1.0 (14.29%), Low: 6.0 (100.0%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
26407 ACOXL 16851 uc010yxk.1 chr2 111490150 111875799 + 599 63.05 0.31 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (0), E18 (63.05) 100.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
26407 chr2 111874426 111877355 wgEncodeRegDnaseClusteredV2 125 score:1000, srow:643475
26407 chr2 111874365 111875222 wgEncodeRegTfbsClusteredV3 E2F1 score:544, expCount:1, expNums:572, expScores:348, srow:2259689
26407 chr2 111874582 111875255 wgEncodeRegTfbsClusteredV3 CTCF score:1000, expCount:98, expNums:0,2,5,9,12,14,16,18,20,24,35,37,39,42,44,48,49,72,137,174,213,262,267,290,463,493,595,597,598,601,603,604,605,606,607,609,612,615,618,621,627,628,629,630,631,635,636,638,639,640,641,642,643,644,645,646,647,648,650,651,652,653,654,655,656,657,658,659,660,661,662,663,664,665,666,667,668,669,670,671,672,673,674,675,676,677,678,679,680,681,682,683,684,685,686,687,688,689, expScores:999,1000,1000,990,1000,657,978,712,838,656,510,1000,1000,796,117,996,906,326,1000,1000,648,690,471,1000,1000,839,1000,1000,1000,1000,1000,1000,169,167,149,619,714,587,597,875,1000,179,1000,209,1000,1000,1000,1000,1000,1000,1000,1000,1000,1000,1000,1000,1000,1000,1000,1000,1000,1000,1000,1000,1000,1000,1000,1000,1000,1000,1000,1000,1000,830,849,1000,770,1000,252,1000,1000,1000,1000,1000,1000,1000,1000,454,1000,674,1000,1000,804,1000,1000,943,734,793, srow:2259697
26407 chr2 111874687 111875379 wgEncodeRegTfbsClusteredV3 STAT1 score:270, expCount:1, expNums:410, expScores:178, srow:2259705
26407 chr2 111874916 111875714 wgEncodeRegTfbsClusteredV3 EZH2 score:270, expCount:2, expNums:3,43, expScores:219,270, srow:2259706
26407 chr2 111874923 111875522 wgEncodeRegTfbsClusteredV3 CTBP2 score:139, expCount:1, expNums:348, expScores:139, srow:2259707
26407 chr2 111874935 111875464 wgEncodeRegTfbsClusteredV3 TFAP2A score:182, expCount:1, expNums:369, expScores:182, srow:2259708
26407 chr2 111874987 111875502 wgEncodeRegTfbsClusteredV3 TFAP2C score:217, expCount:1, expNums:370, expScores:217, srow:2259709
26407 chr2 111875181 111875690 wgEncodeRegTfbsClusteredV3 E2F6 score:558, expCount:1, expNums:386, expScores:558, srow:2259710
26407 chr2 111875233 111875629 wgEncodeRegTfbsClusteredV3 MAX score:332, expCount:2, expNums:278,395, expScores:224,332, srow:2259711
26407 chr2 111875253 111875622 wgEncodeRegTfbsClusteredV3 E2F1 score:191, expCount:1, expNums:384, expScores:191, srow:2259712
26407 chr2 111875271 111875904 wgEncodeRegTfbsClusteredV3 POLR2A score:348, expCount:2, expNums:62,168, expScores:230,348, srow:2259713
26407 chr2 111875435 111876010 wgEncodeRegTfbsClusteredV3 TCF12 score:273, expCount:1, expNums:66, expScores:273, srow:2259714
26407 chr2 111875435 111876030 wgEncodeRegTfbsClusteredV3 TCF7L2 score:1000, expCount:4, expNums:363,413,414,581, expScores:1000,708,1000,502, srow:2259715
26407 chr2 111875442 111875977 wgEncodeRegTfbsClusteredV3 YY1 score:185, expCount:1, expNums:70, expScores:185, srow:2259716
26407 chr2 111875486 111876025 wgEncodeRegTfbsClusteredV3 EP300 score:258, expCount:1, expNums:60, expScores:258, srow:2259717
26407 chr2 111875494 111875997 wgEncodeRegTfbsClusteredV3 REST score:250, expCount:1, expNums:59, expScores:250, srow:2259718
26407 chr2 111875514 111875997 wgEncodeRegTfbsClusteredV3 ZBTB33 score:241, expCount:1, expNums:71, expScores:241, srow:2259719
26407 chr2 111875532 111875901 wgEncodeRegTfbsClusteredV3 CHD2 score:132, expCount:1, expNums:380, expScores:132, srow:2259720
26407 chr2 111875562 111875961 wgEncodeRegTfbsClusteredV3 FOS score:295, expCount:4, expNums:457,556,557,559, expScores:295,206,238,253, srow:2259721
26407 chr2 111875597 111875916 wgEncodeRegTfbsClusteredV3 JUND score:206, expCount:1, expNums:350, expScores:206, srow:2259722
26407 chr2 111875619 111876234 wgEncodeRegTfbsClusteredV3 CHD1 score:207, expCount:1, expNums:4, expScores:207, srow:2259723
26407 chr2 111875655 111875756 wgEncodeRegTfbsClusteredV3 E2F1 score:519, expCount:1, expNums:390, expScores:519, srow:2259724
26407 chr2 111875681 111875872 wgEncodeRegTfbsClusteredV3 FOSL2 score:666, expCount:1, expNums:52, expScores:666, srow:2259725
26407 chr2 111875683 111876352 wgEncodeRegTfbsClusteredV3 RBBP5 score:180, expCount:1, expNums:8, expScores:180, srow:2259726
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  • 25 of 58 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
26407 cellmeth_recounts PrEC: 124, LNCaP: 553, DU145: 27
26407 cellmeth_diffreps_PrECvsLNCaP A=60, B=340, Length=920, Event=Up, log2FC=2.5, padj=0
26407 cellmeth_diffreps_PrECvsDU145 A=57, B=10, Length=400, Event=Down, log2FC=-2.51, padj=1.52947499576406e-07
26407 cellmeth_diffreps_PrECvsDU145 A=1083, B=57, Length=1940, Event=Down, log2FC=-4.25, padj=0
26407 cellmeth_diffreps_LNCaPvsDU145 A=2014.08, B=70.16, Length=3000, Event=Down, log2FC=-4.84, padj=0
26407 cellexp id=ENSG00000153093, name=ACOXL, PrEC=2, str=5, LNCaP=81, str=81, DU145=140, str=290
26407 tcgameth site:cg03171003, B=0.64, L=0.72, H=0.72
26407 tcgameth site:cg04202892, B=0.6, L=0.69, H=0.71
26407 tcgameth site:cg04780086, B=0.51, L=0.65, H=0.62
26407 tcgameth site:cg18646521, B=0.44, L=0.57, H=0.56
26407 tcgameth site:cg27624162, B=0.54, L=0.68, H=0.66
26407 tcgaexp gene=ACOXL, entrez=55289, pos=chr2:111490150-111875799(+), B=168, L=194, M=182, H=157
26407 tcgaexp gene=RGPD5, entrez=84220, pos=chr2:110561556-113179689(+), B=246, L=163, M=204, H=232