DMR 26565 chr2:175201851-175202000 (150bp)

DMR Stats
Positionchr2:175201851-175202000 (View on UCSC)
Width150bp
Genomic Context3' end
Nearest GenesSP9 (0bp away)
ANODEV p-value0.0424323375899
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
26565 SP9 17283 uc010zem.1 chr2 175199821 175202268 + 150 100.0 0.39 0 0.0 E1 (0), I1 (0), E2 (100) 100.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
26565 chr2 175201886 175203035 wgEncodeRegDnaseClusteredV2 87 score:974, srow:666785
26565 chr2 175196924 175203056 wgEncodeRegTfbsClusteredV3 EZH2 score:1000, expCount:11, expNums:3,6,13,15,17,19,21,25,36,40,43, expScores:200,705,342,294,179,93,368,226,228,229,264, srow:2334382
26565 chr2 175200483 175202037 wgEncodeRegTfbsClusteredV3 MAX score:636, expCount:4, expNums:223,278,439,511, expScores:415,150,251,386, srow:2334408
26565 chr2 175200556 175202077 wgEncodeRegTfbsClusteredV3 E2F6 score:566, expCount:2, expNums:215,495, expScores:215,311, srow:2334411
26565 chr2 175201164 175201906 wgEncodeRegTfbsClusteredV3 MYC score:242, expCount:3, expNums:489,560,626, expScores:222,140,242, srow:2334419
26565 chr2 175201248 175201871 wgEncodeRegTfbsClusteredV3 CTCF score:1000, expCount:44, expNums:2,18,20,24,48,49,137,174,213,262,290,463,493,595,597,601,603,604,605,606,607,621,627,628,629,630,631,635,636,639,642,647,648,651,653,654,655,661,663,665,671,679,681,688, expScores:156,152,107,279,245,166,295,503,540,154,118,121,220,1000,140,154,224,251,197,227,209,326,333,742,442,431,551,170,198,142,117,250,288,200,123,166,219,126,118,153,130,200,115,174, srow:2334420
26565 chr2 175201419 175201854 wgEncodeRegTfbsClusteredV3 UBTF score:178, expCount:1, expNums:549, expScores:178, srow:2334423
26565 chr2 175201446 175201901 wgEncodeRegTfbsClusteredV3 CCNT2 score:128, expCount:1, expNums:476, expScores:128, srow:2334424
26565 chr2 175201448 175202103 wgEncodeRegTfbsClusteredV3 E2F1 score:350, expCount:1, expNums:572, expScores:350, srow:2334425
26565 chr2 175201466 175201955 wgEncodeRegTfbsClusteredV3 TAF1 score:147, expCount:1, expNums:157, expScores:147, srow:2334426
26565 chr2 175201508 175201883 wgEncodeRegTfbsClusteredV3 TBP score:153, expCount:1, expNums:359, expScores:153, srow:2334430
26565 chr2 175201514 175201853 wgEncodeRegTfbsClusteredV3 HDAC2 score:145, expCount:1, expNums:181, expScores:145, srow:2334431
26565 chr2 175201588 175201851 wgEncodeRegTfbsClusteredV3 EBF1 score:176, expCount:1, expNums:86, expScores:176, srow:2334432
26565 chr2 175201590 175201893 wgEncodeRegTfbsClusteredV3 FOXP2 score:128, expCount:1, expNums:251, expScores:128, srow:2334433
26565 chr2 175201613 175202042 wgEncodeRegTfbsClusteredV3 POLR2A score:363, expCount:1, expNums:61, expScores:363, srow:2334436
26565 chr2 175201614 175201937 wgEncodeRegTfbsClusteredV3 ZEB1 score:160, expCount:1, expNums:121, expScores:160, srow:2334437
26565 chr2 175201707 175201956 wgEncodeRegTfbsClusteredV3 TEAD4 score:307, expCount:1, expNums:160, expScores:307, srow:2334438
26565 chr2 175201923 175202166 wgEncodeRegTfbsClusteredV3 EGR1 score:189, expCount:1, expNums:216, expScores:189, srow:2334439
26565 chr2 175201862 175201877 tfbsConsSites V$E47_02 score:911, zScore:2.24, srow:2862224
26565 chr2 175201864 175201875 tfbsConsSites V$AREB6_03 score:953, zScore:2.92, srow:2862225
26565 chr2 175201864 175201875 tfbsConsSites V$LMO2COM_01 score:940, zScore:2.01, srow:2862226
26565 chr2 175201874 175201893 tfbsConsSites V$ARNT_02 score:776, zScore:1.73, srow:2862227
26565 chr2 175201903 175201912 tfbsConsSites V$MYB_Q6 score:915, zScore:1.74, srow:2862228
26565 chr2 175201914 175201931 tfbsConsSites V$CEBP_C score:817, zScore:1.93, srow:2862229
26565 chr2 175201918 175201938 tfbsConsSites V$PAX4_01 score:803, zScore:1.75, srow:2862230
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  • 25 of 43 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
26565 cellmeth_recounts PrEC: 5, LNCaP: 23, DU145: 14
26565 cellexp id=ENSG00000217236, name=SP9, PrEC=0, str=0, LNCaP=30, str=19, DU145=0, str=0
26565 cellexp id=ENSG00000268241, name=AC018470.1, PrEC=0, str=0, LNCaP=3, str=0, DU145=0, str=0
26565 tcgaexp gene=SP9, entrez=100131390, pos=chr2:175199821-175202268(+), B=0, L=3, M=1, H=3