DMR 26784 chr2:239306101-239306250 (150bp)

DMR Stats
Positionchr2:239306101-239306250 (View on UCSC)
Width150bp
Genomic Contextexon
Nearest GenesTRAF3IP1 (0bp away)
ANODEV p-value0.0241391020031
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
26784 TRAF3IP1 17800 uc002vye.3 chr2 239229185 239309541 + 150 100.0 0.02 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (100), I16 (0), E17 (0) 0.0
26784 TRAF3IP1 17800 uc002vyf.3 chr2 239229185 239309541 + 150 100.0 0.02 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (100), I14 (0), E15 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
26784 chr2 239306101 239306290 wgEncodeRegDnaseClusteredV2 4 score:142, srow:695028
26784 chr2 239306113 239306123 tfbsConsSites V$NFE2_01 score:873, zScore:1.9, srow:3024082
26784 chr2 239306154 239306162 tfbsConsSites V$GATA3_01 score:940, zScore:2, srow:3024083
26784 chr2 239306197 239306212 tfbsConsSites V$ELK1_01 score:856, zScore:1.98, srow:3024084
26784 chr2 239306247 239306262 tfbsConsSites V$BRN2_01 score:924, zScore:4.09, srow:3024085
26784 chr2 239306109 239306109 cosmic COSM330709 srow:734780
26784 chr2 239306171 239306171 cosmic COSM118837 srow:734781
26784 chr2 239306183 239306183 cosmic COSM345301 srow:734782
26784 chr2 239306098 239306103 phastConsElements100way lod=56 score:392, srow:5217230
26784 chr2 239306110 239306113 phastConsElements100way lod=23 score:304, srow:5217231
26784 chr2 239306115 239306119 phastConsElements100way lod=65 score:407, srow:5217232
26784 chr2 239306121 239306122 phastConsElements100way lod=18 score:280, srow:5217233
26784 chr2 239306124 239306140 phastConsElements100way lod=187 score:511, srow:5217234
26784 chr2 239306143 239306143 phastConsElements100way lod=15 score:262, srow:5217235
26784 chr2 239306145 239306146 phastConsElements100way lod=31 score:333, srow:5217236
26784 chr2 239306151 239306158 phastConsElements100way lod=94 score:443, srow:5217237
26784 chr2 239306160 239306167 phastConsElements100way lod=105 score:454, srow:5217238
26784 chr2 239306169 239306170 phastConsElements100way lod=20 score:290, srow:5217239
26784 chr2 239306175 239306185 phastConsElements100way lod=112 score:461, srow:5217240
26784 chr2 239306187 239306197 phastConsElements100way lod=103 score:452, srow:5217241
26784 chr2 239306199 239306200 phastConsElements100way lod=24 score:308, srow:5217242
26784 chr2 239306202 239306203 phastConsElements100way lod=19 score:285, srow:5217243
26784 chr2 239306205 239306206 phastConsElements100way lod=17 score:274, srow:5217244
26784 chr2 239306208 239306212 phastConsElements100way lod=70 score:414, srow:5217245
26784 chr2 239306214 239306239 phastConsElements100way lod=329 score:567, srow:5217246
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Omics Overlaps

Dmrid Omic Set Data Plot
26784 cellmeth_recounts PrEC: 7, LNCaP: 10, DU145: 3
26784 cellexp id=ENSG00000204104, name=TRAF3IP1, PrEC=1630, str=1372, LNCaP=1259, str=1653, DU145=1099, str=1210
26784 tcgameth site:cg09675853, B=0.98, L=0.98, H=0.98
26784 tcgaexp gene=TRAF3IP1, entrez=26146, pos=chr2:239229185-239309541(+), B=1527, L=1337, M=1243, H=1480