DMR 26786 chr2:239347901-239348050 (150bp)

DMR Stats
Positionchr2:239347901-239348050 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesASB1 (0bp away)
ANODEV p-value0.00427250889175
FrequenciesBenign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
26786 ASB1 17801 uc002vyg.3 chr2 239335626 239360891 + 150 100.0 0.03 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (100), E4 (0), I4 (0), E5 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
26786 chr2 239347841 239348070 wgEncodeRegDnaseClusteredV2 10 score:946, srow:695078
26786 chr2 239347888 239348573 wgEncodeRegTfbsClusteredV3 POLR2A score:640, expCount:10, expNums:61,62,163,168,206,249,259,275,563,564, expScores:310,221,640,409,211,163,266,544,198,228, srow:2429267
26786 chr2 239347956 239348553 wgEncodeRegTfbsClusteredV3 GABPA score:270, expCount:2, expNums:54,166, expScores:270,127, srow:2429268
26786 chr2 239347966 239348289 wgEncodeRegTfbsClusteredV3 REST score:202, expCount:1, expNums:274, expScores:202, srow:2429269
26786 chr2 239347970 239348565 wgEncodeRegTfbsClusteredV3 NFATC1 score:308, expCount:1, expNums:96, expScores:308, srow:2429270
26786 chr2 239347972 239348547 wgEncodeRegTfbsClusteredV3 TCF12 score:504, expCount:2, expNums:66,116, expScores:504,127, srow:2429271
26786 chr2 239347988 239348471 wgEncodeRegTfbsClusteredV3 ATF3 score:319, expCount:1, expNums:45, expScores:319, srow:2429272
26786 chr2 239347991 239348620 wgEncodeRegTfbsClusteredV3 STAT5A score:328, expCount:1, expNums:114, expScores:328, srow:2429273
26786 chr2 239348009 239348517 wgEncodeRegTfbsClusteredV3 NR3C1 score:651, expCount:3, expNums:56,57,58, expScores:651,362,266, srow:2429274
26786 chr2 239348010 239348289 wgEncodeRegTfbsClusteredV3 CREB1 score:379, expCount:1, expNums:47, expScores:379, srow:2429275
26786 chr2 239348042 239348523 wgEncodeRegTfbsClusteredV3 MYC score:617, expCount:3, expNums:560,561,611, expScores:240,424,97, srow:2429276
26786 chr2 239348043 239348414 wgEncodeRegTfbsClusteredV3 CEBPB score:1000, expCount:3, expNums:277,378,462, expScores:379,1000,1000, srow:2429277
26786 chr2 239348043 239348503 wgEncodeRegTfbsClusteredV3 MAX score:475, expCount:2, expNums:278,395, expScores:175,475, srow:2429278
26786 chr2 239346628 239348627 cpgShelf — values(x.gr)[overs$srow, ]:24299
  • 14 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
26786 cellmeth_recounts PrEC: 0, LNCaP: 5, DU145: 1
26786 cellexp id=ENSG00000065802, name=ASB1, PrEC=8174, str=5403, LNCaP=2204, str=2488, DU145=2094, str=1902
26786 tcgaexp gene=ASB1, entrez=51665, pos=chr2:239335626-239360891(+), B=1350, L=1060, M=1013, H=954