DMR 26816 chr2:241758051-241758800 (750bp)

DMR Stats
Positionchr2:241758051-241758800 (View on UCSC)
Width750bp
Genomic Contextintron
Nearest GenesKIF1A (0bp away)
ANODEV p-value1.54629246158e-06
FrequenciesBenign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
26816 KIF1A 17832 uc002vzz.2 chr2 241662830 241759725 - 750 100.0 0.28 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (0), E18 (0), I18 (0), E19 (0), I19 (0), E20 (0), I20 (0), E21 (0), I21 (0), E22 (0), I22 (0), E23 (0), I23 (0), E24 (0), I24 (0), E25 (0), I25 (0), E26 (0), I26 (0), E27 (0), I27 (0), E28 (0), I28 (0), E29 (0), I29 (0), E30 (0), I30 (0), E31 (0), I31 (0), E32 (0), I32 (0), E33 (0), I33 (0), E34 (0), I34 (0), E35 (0), I35 (0), E36 (0), I36 (0), E37 (0), I37 (0), E38 (0), I38 (0), E39 (0), I39 (0), E40 (0), I40 (0), E41 (0), I41 (0), E42 (0), I42 (0), E43 (0) 0.0
26816 KIF1A 17832 uc010fzk.3 chr2 241653181 241759725 - 750 100.0 0.41 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (0), E18 (0), I18 (0), E19 (0), I19 (0), E20 (0), I20 (0), E21 (0), I21 (0), E22 (0), I22 (0), E23 (0), I23 (0), E24 (0), I24 (0), E25 (0), I25 (0), E26 (0), I26 (0), E27 (0), I27 (0), E28 (0), I28 (0), E29 (0), I29 (0), E30 (0), I30 (0), E31 (0), I31 (0), E32 (0), I32 (0), E33 (0), I33 (0), E34 (0), I34 (0), E35 (0), I35 (0), E36 (0), I36 (0), E37 (0), I37 (0), E38 (0), I38 (0), E39 (0), I39 (0), E40 (0), I40 (0), E41 (0), I41 (0), E42 (0), I42 (0), E43 (0), I43 (0), E44 (0), I44 (0), E45 (0), I45 (0), E46 (0), I46 (0), E47 (0), I47 (0), E48 (0), I48 (0), E49 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
26816 chr2 241757766 241758835 wgEncodeRegDnaseClusteredV2 36 score:945, srow:697644
26816 chr2 241757598 241760112 wgEncodeRegTfbsClusteredV3 EZH2 score:587, expCount:7, expNums:13,19,21,36,38,40,43, expScores:352,158,323,296,276,221,264, srow:2433227
26816 chr2 241757859 241758128 wgEncodeRegTfbsClusteredV3 REST score:147, expCount:1, expNums:257, expScores:147, srow:2433228
26816 chr2 241757918 241758143 wgEncodeRegTfbsClusteredV3 YY1 score:606, expCount:1, expNums:162, expScores:606, srow:2433229
26816 chr2 241757966 241758269 wgEncodeRegTfbsClusteredV3 MYC score:136, expCount:1, expNums:347, expScores:136, srow:2433230
26816 chr2 241758266 241758589 wgEncodeRegTfbsClusteredV3 BACH1 score:172, expCount:1, expNums:341, expScores:172, srow:2433231
26816 chr2 241758289 241758578 wgEncodeRegTfbsClusteredV3 MAFK score:155, expCount:1, expNums:351, expScores:155, srow:2433232
26816 chr2 241758411 241758930 wgEncodeRegTfbsClusteredV3 SIN3A score:240, expCount:1, expNums:357, expScores:240, srow:2433233
26816 chr2 241758439 241758928 wgEncodeRegTfbsClusteredV3 TAF1 score:178, expCount:1, expNums:157, expScores:178, srow:2433234
26816 chr2 241758777 241759252 wgEncodeRegTfbsClusteredV3 POLR2A score:181, expCount:1, expNums:610, expScores:181, srow:2433235
26816 chr2 241758236 241758247 tfbsConsSites V$NFKB_C score:849, zScore:1.86, srow:3026922
26816 chr2 241758281 241758300 tfbsConsSites V$P53_01 score:686, zScore:1.9, srow:3026923
26816 chr2 241758387 241758400 tfbsConsSites V$MYCMAX_01 score:796, zScore:1.71, srow:3026924
26816 chr2 241758390 241758397 tfbsConsSites V$ATF6_01 score:896, zScore:2.09, srow:3026925
26816 chr2 241758390 241758401 tfbsConsSites V$EGR2_01 score:843, zScore:1.93, srow:3026926
26816 chr2 241758390 241758409 tfbsConsSites V$P53_01 score:671, zScore:1.64, srow:3026927
26816 chr2 241758390 241758417 tfbsConsSites V$PAX5_02 score:789, zScore:2.13, srow:3026928
26816 chr2 241758394 241758405 tfbsConsSites V$E2F_03 score:849, zScore:1.69, srow:3026929
26816 chr2 241758398 241758413 tfbsConsSites V$ELK1_01 score:866, zScore:2.15, srow:3026930
26816 chr2 241758400 241758409 tfbsConsSites V$GATA1_01 score:942, zScore:1.77, srow:3026931
26816 chr2 241758418 241758431 tfbsConsSites V$ATF_01 score:847, zScore:2.08, srow:3026932
26816 chr2 241758419 241758430 tfbsConsSites V$CREBP1_Q2 score:879, zScore:2.36, srow:3026933
26816 chr2 241758419 241758430 tfbsConsSites V$CREB_Q4 score:876, zScore:1.98, srow:3026934
26816 chr2 241758438 241758454 tfbsConsSites V$PPARG_03 score:795, zScore:2.08, srow:3026935
26816 chr2 241758442 241758454 tfbsConsSites V$TCF11_01 score:909, zScore:1.64, srow:3026936
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  • 25 of 39 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
26816 cellmeth_recounts PrEC: 7, LNCaP: 1521, DU145: 18
26816 cellmeth_diffreps_PrECvsLNCaP A=12, B=1221, Length=1120, Event=Up, log2FC=6.67, padj=0
26816 cellmeth_diffreps_LNCaPvsDU145 A=1373.72, B=22.45, Length=1420, Event=Down, log2FC=-5.94, padj=0
26816 cellexp id=ENSG00000130294, name=KIF1A, PrEC=7, str=16, LNCaP=5688, str=4455, DU145=715, str=72
26816 tcgameth site:cg09969806, B=0.26, L=0.54, H=0.55
26816 tcgameth site:cg12431299, B=0.28, L=0.53, H=0.55
26816 tcgaexp gene=KIF1A, entrez=547, pos=chr2:241653181-241759725(-), B=3311, L=3723, M=3447, H=2561