DMR 26833 chr2:242801951-242802250 (300bp)

DMR Stats
Positionchr2:242801951-242802250 (View on UCSC)
Width300bp
Genomic Contextpromoter
Nearest GenesPDCD1 (892bp away)
ANODEV p-value0.000389609670907
FrequenciesBenign: 1.0 (14.29%), Low: 6.0 (100.0%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
26833 chr2 242801561 242803075 wgEncodeRegDnaseClusteredV2 81 score:1000, srow:698716
26833 chr2 242801215 242801963 wgEncodeRegTfbsClusteredV3 CTCF score:814, expCount:67, expNums:0,2,5,12,16,18,20,24,37,42,44,213,290,463,493,595,597,598,601,603,604,605,606,607,609,612,621,628,629,630,635,638,639,640,641,642,645,646,648,650,651,652,653,654,655,656,658,659,660,661,663,664,666,667,668,671,672,673,674,675,677,679,680,682,683,684,686, expScores:137,414,122,167,458,353,118,297,200,191,195,354,326,190,269,403,814,402,329,609,705,141,143,429,154,206,310,803,453,383,248,112,340,252,104,392,173,197,271,130,553,582,133,190,539,384,140,407,152,466,101,154,120,171,156,229,191,686,287,119,283,236,265,188,117,155,197, srow:2436569
26833 chr2 242801696 242802231 wgEncodeRegTfbsClusteredV3 SIN3A score:191, expCount:1, expNums:312, expScores:191, srow:2436573
26833 chr2 242801747 242802266 wgEncodeRegTfbsClusteredV3 ATF2 score:473, expCount:1, expNums:79, expScores:473, srow:2436574
26833 chr2 242801769 242802288 wgEncodeRegTfbsClusteredV3 FOXM1 score:404, expCount:1, expNums:90, expScores:404, srow:2436575
26833 chr2 242801792 242802201 wgEncodeRegTfbsClusteredV3 TBL1XR1 score:213, expCount:1, expNums:316, expScores:213, srow:2436576
26833 chr2 242801799 242802178 wgEncodeRegTfbsClusteredV3 TBP score:257, expCount:1, expNums:317, expScores:257, srow:2436577
26833 chr2 242801800 242802169 wgEncodeRegTfbsClusteredV3 RELA score:331, expCount:1, expNums:325, expScores:331, srow:2436578
26833 chr2 242801802 242802117 wgEncodeRegTfbsClusteredV3 EBF1 score:248, expCount:1, expNums:292, expScores:248, srow:2436579
26833 chr2 242801805 242802184 wgEncodeRegTfbsClusteredV3 CHD2 score:163, expCount:1, expNums:288, expScores:163, srow:2436580
26833 chr2 242801809 242802178 wgEncodeRegTfbsClusteredV3 EP300 score:416, expCount:3, expNums:99,304,305, expScores:277,403,416, srow:2436581
26833 chr2 242801842 242802432 wgEncodeRegTfbsClusteredV3 POLR2A score:356, expCount:5, expNums:306,307,334,336,338, expScores:356,175,212,200,166, srow:2436582
26833 chr2 242801842 242802161 wgEncodeRegTfbsClusteredV3 SP1 score:213, expCount:1, expNums:112, expScores:213, srow:2436583
26833 chr2 242801864 242802159 wgEncodeRegTfbsClusteredV3 MEF2C score:252, expCount:1, expNums:94, expScores:252, srow:2436584
26833 chr2 242801888 242802062 wgEncodeRegTfbsClusteredV3 NFATC1 score:324, expCount:1, expNums:96, expScores:324, srow:2436585
26833 chr2 242801889 242802146 wgEncodeRegTfbsClusteredV3 NFIC score:560, expCount:1, expNums:97, expScores:560, srow:2436586
26833 chr2 242801890 242802099 wgEncodeRegTfbsClusteredV3 BATF score:1000, expCount:1, expNums:81, expScores:1000, srow:2436587
26833 chr2 242801893 242802182 wgEncodeRegTfbsClusteredV3 MEF2A score:261, expCount:1, expNums:93, expScores:261, srow:2436588
26833 chr2 242801895 242802075 wgEncodeRegTfbsClusteredV3 SPI1 score:1000, expCount:2, expNums:107,126, expScores:715,1000, srow:2436589
26833 chr2 242801913 242802172 wgEncodeRegTfbsClusteredV3 RUNX3 score:991, expCount:1, expNums:109, expScores:991, srow:2436590
26833 chr2 242801923 242802186 wgEncodeRegTfbsClusteredV3 PAX5 score:418, expCount:2, expNums:100,101, expScores:418,320, srow:2436591
26833 chr2 242801927 242802146 wgEncodeRegTfbsClusteredV3 PBX3 score:155, expCount:1, expNums:102, expScores:155, srow:2436592
26833 chr2 242801937 242802087 wgEncodeRegTfbsClusteredV3 IRF4 score:360, expCount:1, expNums:92, expScores:360, srow:2436593
26833 chr2 242801960 242802161 wgEncodeRegTfbsClusteredV3 TCF12 score:622, expCount:1, expNums:116, expScores:622, srow:2436594
26833 chr2 242801965 242802134 wgEncodeRegTfbsClusteredV3 TCF3 score:368, expCount:1, expNums:117, expScores:368, srow:2436595
  • Page 1 of 2
  • 25 of 33 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
26833 cellmeth_recounts PrEC: 11, LNCaP: 11, DU145: 4
26833 cellmeth_diffreps_PrECvsDU145 A=16, B=1, Length=200, Event=Down, log2FC=-4, padj=0.00241302194969176
26833 tcgameth site:cg00795812, B=0.36, L=0.53, H=0.53
26833 tcgameth site:cg03889044, B=0.37, L=0.5, H=0.52
26833 tcgameth site:cg17322655, B=0.48, L=0.63, H=0.64
26833 tcgameth site:cg20805133, B=0.27, L=0.58, H=0.56
26833 tcgameth site:cg27051683, B=0.44, L=0.56, H=0.55