DMR 26976 chr3:49842201-49842350 (150bp)
| DMR Stats | |
|---|---|
| Position | chr3:49842201-49842350 (View on UCSC) |
| Width | 150bp |
| Genomic Context | 3' end |
| Nearest Genes | FAM212A (0bp away) |
| ANODEV p-value | 0.0093279846944 |
| Frequencies | Benign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 8.0 (88.89 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26976 | FAM212A | 20172 | uc003cxq.1 | chr3 | 49840687 | 49842463 | + | 150 | 100.0 | 0.03 | 0 | 0.0 | E1 (0), I1 (0), E2 (100) | 100.0 |
- 1 genes
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 26976 | chr3 | 49841786 | 49842550 | wgEncodeRegDnaseClusteredV2 | 35 | score:497, srow:806076 |
| 26976 | chr3 | 49839863 | 49842485 | wgEncodeRegTfbsClusteredV3 | POLR2A | score:541, expCount:30, expNums:61,62,105,131,163,206,207,229,275,306,328,330,334,336,340,362,402,445,461,520,523,525,563,564,577,585,599,619,622,637, expScores:318,285,358,350,250,285,278,482,277,296,319,411,162,514,195,113,254,88,185,226,251,304,300,286,541,299,237,313,203,134, srow:2797102 |
| 26976 | chr3 | 49842205 | 49842218 | tfbsConsSites | V$MYCMAX_01 | score:837, zScore:2.31, srow:3358378 |
| 26976 | chr3 | 49842225 | 49842245 | tfbsConsSites | V$PAX6_01 | score:780, zScore:2.19, srow:3358379 |
| 26976 | chr3 | 49842262 | 49842262 | cosmic | COSM116693 | srow:823579 |
| 26976 | chr3 | 49842272 | 49842272 | cosmic | COSM295126 | srow:823580 |
| 26976 | chr3 | 49842202 | 49842206 | phastConsElements100way | lod=22 | score:300, srow:5819111 |
| 26976 | chr3 | 49842217 | 49842224 | phastConsElements100way | lod=36 | score:348, srow:5819112 |
| 26976 | chr3 | 49842226 | 49842239 | phastConsElements100way | lod=52 | score:385, srow:5819113 |
| 26976 | chr3 | 49842241 | 49842260 | phastConsElements100way | lod=101 | score:450, srow:5819114 |
| 26976 | chr3 | 49842262 | 49842269 | phastConsElements100way | lod=51 | score:383, srow:5819115 |
| 26976 | chr3 | 49842273 | 49842275 | phastConsElements100way | lod=26 | score:316, srow:5819116 |
| 26976 | chr3 | 49842277 | 49842278 | phastConsElements100way | lod=19 | score:285, srow:5819117 |
| 26976 | chr3 | 49842281 | 49842284 | phastConsElements100way | lod=24 | score:308, srow:5819118 |
| 26976 | chr3 | 49842286 | 49842287 | phastConsElements100way | lod=23 | score:304, srow:5819119 |
| 26976 | chr3 | 49842290 | 49842293 | phastConsElements100way | lod=31 | score:333, srow:5819120 |
| 26976 | chr3 | 49842298 | 49842302 | phastConsElements100way | lod=45 | score:370, srow:5819121 |
| 26976 | chr3 | 49842305 | 49842320 | phastConsElements100way | lod=85 | score:433, srow:5819122 |
| 26976 | chr3 | 49842329 | 49842329 | phastConsElements100way | lod=15 | score:262, srow:5819123 |
| 26976 | chr3 | 49842331 | 49842338 | phastConsElements100way | lod=44 | score:368, srow:5819124 |
| 26976 | chr3 | 49842343 | 49842344 | phastConsElements100way | lod=34 | score:343, srow:5819125 |
| 26976 | chr3 | 49842349 | 49842350 | phastConsElements100way | lod=13 | score:247, srow:5819126 |
| 26976 | chr3 | 49841192 | 49843191 | cpgShore | — | values(x.gr)[overs$srow, ]:33447 |
- 23 featuress
