DMR 27 chr1:2802551-2802700 (150bp)

DMR Stats
Positionchr1:2802551-2802700 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesTTC34 (96320bp away)
ANODEV p-value0.0170006569564
FrequenciesBenign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
27 chr1 2802626 2802915 wgEncodeRegDnaseClusteredV2 2 score:267, srow:1945
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
27 cellmeth_recounts PrEC: 39, LNCaP: 0, DU145: 1
27 cellmeth_diffreps_PrECvsLNCaP A=463, B=5, Length=2420, Event=Down, log2FC=-6.53, padj=0
27 cellmeth_diffreps_PrECvsDU145 A=68, B=2, Length=460, Event=Down, log2FC=-5.09, padj=0
27 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
27 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305