DMR 27145 chr3:129024451-129024850 (400bp)

DMR Stats
Positionchr3:129024451-129024850 (View on UCSC)
Width400bp
Genomic Context3' end
Nearest GenesC3orf37 (315bp away)
ANODEV p-value8.30692261933e-07
FrequenciesBenign: 0.0 (0.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
27145 chr3 129024521 129024935 wgEncodeRegDnaseClusteredV2 95 score:1000, srow:835172
27145 chr3 129024122 129024791 wgEncodeRegTfbsClusteredV3 RBBP5 score:283, expCount:1, expNums:8, expScores:283, srow:2883421
27145 chr3 129024186 129025004 wgEncodeRegTfbsClusteredV3 POLR2A score:545, expCount:12, expNums:105,146,147,229,306,332,336,338,340,583,610,619, expScores:468,434,545,323,328,458,350,259,295,486,213,140, srow:2883422
27145 chr3 129024186 129024785 wgEncodeRegTfbsClusteredV3 CTBP2 score:137, expCount:1, expNums:348, expScores:137, srow:2883423
27145 chr3 129024294 129024813 wgEncodeRegTfbsClusteredV3 SIN3A score:353, expCount:1, expNums:357, expScores:353, srow:2883424
27145 chr3 129024350 129024769 wgEncodeRegTfbsClusteredV3 BCLAF1 score:173, expCount:1, expNums:84, expScores:173, srow:2883425
27145 chr3 129024383 129024738 wgEncodeRegTfbsClusteredV3 TAF7 score:165, expCount:1, expNums:158, expScores:165, srow:2883426
27145 chr3 129024395 129024770 wgEncodeRegTfbsClusteredV3 TBP score:258, expCount:1, expNums:359, expScores:258, srow:2883427
27145 chr3 129024419 129024650 wgEncodeRegTfbsClusteredV3 TAF1 score:423, expCount:1, expNums:157, expScores:423, srow:2883428
27145 chr3 129024425 129024700 wgEncodeRegTfbsClusteredV3 USF2 score:150, expCount:1, expNums:360, expScores:150, srow:2883429
27145 chr3 129024427 129024770 wgEncodeRegTfbsClusteredV3 GABPA score:189, expCount:1, expNums:140, expScores:189, srow:2883430
27145 chr3 129024430 129024952 wgEncodeRegTfbsClusteredV3 MAZ score:288, expCount:2, expNums:297,512, expScores:204,288, srow:2883431
27145 chr3 129024442 129024785 wgEncodeRegTfbsClusteredV3 MXI1 score:168, expCount:1, expNums:353, expScores:168, srow:2883432
27145 chr3 129024459 129024794 wgEncodeRegTfbsClusteredV3 YY1 score:273, expCount:1, expNums:162, expScores:273, srow:2883433
27145 chr3 129024460 129024769 wgEncodeRegTfbsClusteredV3 EP300 score:264, expCount:1, expNums:145, expScores:264, srow:2883434
27145 chr3 129024471 129024850 wgEncodeRegTfbsClusteredV3 NFYB score:465, expCount:2, expNums:302,517, expScores:303,465, srow:2883435
27145 chr3 129024475 129024730 wgEncodeRegTfbsClusteredV3 NANOG score:207, expCount:1, expNums:143, expScores:207, srow:2883436
27145 chr3 129024480 129024789 wgEncodeRegTfbsClusteredV3 POU2F2 score:606, expCount:2, expNums:106,125, expScores:606,606, srow:2883437
27145 chr3 129024486 129024845 wgEncodeRegTfbsClusteredV3 IRF1 score:168, expCount:1, expNums:506, expScores:168, srow:2883438
27145 chr3 129024502 129024751 wgEncodeRegTfbsClusteredV3 TEAD4 score:167, expCount:1, expNums:160, expScores:167, srow:2883439
27145 chr3 129024505 129025164 wgEncodeRegTfbsClusteredV3 MTA3 score:317, expCount:1, expNums:95, expScores:317, srow:2883440
27145 chr3 129024509 129024912 wgEncodeRegTfbsClusteredV3 ZBTB7A score:160, expCount:1, expNums:247, expScores:160, srow:2883441
27145 chr3 129024517 129024886 wgEncodeRegTfbsClusteredV3 RUNX3 score:326, expCount:1, expNums:109, expScores:326, srow:2883442
27145 chr3 129024519 129024842 wgEncodeRegTfbsClusteredV3 NFYA score:167, expCount:1, expNums:516, expScores:167, srow:2883443
27145 chr3 129024528 129024797 wgEncodeRegTfbsClusteredV3 FOS score:220, expCount:1, expNums:478, expScores:220, srow:2883444
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Omics Overlaps

Dmrid Omic Set Data Plot
27145 cellmeth_recounts PrEC: 0, LNCaP: 43, DU145: 8
27145 cellmeth_diffreps_PrECvsLNCaP A=0, B=34, Length=520, Event=Up, log2FC=Inf, padj=5.814480836684e-10
27145 cellmeth_diffreps_LNCaPvsDU145 A=28.86, B=3.74, Length=360, Event=Down, log2FC=-2.95, padj=0.000476254783625507
27145 cellexp id=ENSG00000183624, name=HMCES, PrEC=6839, str=3574, LNCaP=3280, str=3721, DU145=2643, str=2613
27145 tcgameth site:cg00465970, B=0.31, L=0.68, H=0.65