DMR 27334 chr3:194118551-194119150 (600bp)

DMR Stats
Positionchr3:194118551-194119150 (View on UCSC)
Width600bp
Genomic Contextpromoter
Nearest GenesGP5 (0bp away)
ANODEV p-value1.72874552387e-08
FrequenciesBenign: 0.0 (0.0%), Low: 6.0 (100.0%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
27334 GP5 21173 uc003ftv.1 chr3 194115550 194119995 - 600 100.0 2.67 0 0.0 E1 (0), I1 (23), E2 (77.17) 0.0
27334 GP5 21173 uc021xiz.1 chr3 194117329 194119011 - 461 76.83 1.69 0 100.0 E1 (76.83) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
27334 chr3 194117446 194119275 wgEncodeRegDnaseClusteredV2 81 score:1000, srow:861380
27334 chr3 194117743 194118987 wgEncodeRegTfbsClusteredV3 EZH2 score:401, expCount:3, expNums:6,17,43, expScores:401,165,270, srow:2976414
27334 chr3 194118317 194118626 wgEncodeRegTfbsClusteredV3 SUZ12 score:108, expCount:1, expNums:358, expScores:108, srow:2976416
27334 chr3 194118583 194118591 tfbsConsSites V$AREB6_04 score:972, zScore:2.06, srow:3671884
27334 chr3 194118618 194118623 tfbsConsSites V$AML1_01 score:1000, zScore:1.78, srow:3671885
27334 chr3 194118622 194118645 tfbsConsSites V$STAT5A_02 score:804, zScore:2.74, srow:3671886
27334 chr3 194118648 194118658 tfbsConsSites V$EVI1_05 score:851, zScore:2.04, srow:3671887
27334 chr3 194118683 194118706 tfbsConsSites V$HTF_01 score:772, zScore:1.9, srow:3671888
27334 chr3 194118707 194118719 tfbsConsSites V$IRF1_01 score:819, zScore:1.9, srow:3671889
27334 chr3 194118716 194118728 tfbsConsSites V$RORA1_01 score:889, zScore:2.06, srow:3671890
27334 chr3 194118840 194118855 tfbsConsSites V$ELK1_01 score:859, zScore:2.03, srow:3671891
27334 chr3 194118928 194118937 tfbsConsSites V$HMX1_01 score:864, zScore:2.57, srow:3671892
27334 chr3 194118932 194118938 tfbsConsSites V$NKX25_01 score:948, zScore:1.73, srow:3671893
27334 chr3 194118558 194118558 cosmic COSM209332 srow:874620
27334 chr3 194118573 194118573 cosmic COSM1421769 srow:874621
27334 chr3 194118573 194118573 cosmic COSM1421768 srow:874622
27334 chr3 194118663 194118663 cosmic COSM311521 srow:874623
27334 chr3 194118663 194118663 cosmic COSM311520 srow:874624
27334 chr3 194118664 194118664 cosmic COSM209333 srow:874625
27334 chr3 194118665 194118665 cosmic COSM1421771 srow:874626
27334 chr3 194118665 194118665 cosmic COSM1421770 srow:874627
27334 chr3 194118758 194118758 cosmic COSM729893 srow:874628
27334 chr3 194118758 194118758 cosmic COSM729892 srow:874629
27334 chr3 194118836 194118836 cosmic COSM402418 srow:874630
27334 chr3 194118836 194118836 cosmic COSM402417 srow:874631
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  • 25 of 75 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
27334 cellmeth_recounts PrEC: 32, LNCaP: 530, DU145: 9
27334 cellmeth_diffreps_PrECvsLNCaP A=169, B=1842, Length=2560, Event=Up, log2FC=3.45, padj=0
27334 cellmeth_diffreps_PrECvsDU145 A=45, B=2, Length=420, Event=Down, log2FC=-4.49, padj=3.8539251522487e-10
27334 cellmeth_diffreps_LNCaPvsDU145 A=1743.61, B=35.55, Length=1880, Event=Down, log2FC=-5.62, padj=0
27334 cellexp id=ENSG00000178732, name=GP5, PrEC=2, str=5, LNCaP=1, str=0, DU145=3, str=5
27334 tcgameth site:cg18780769, B=0.42, L=0.57, H=0.58
27334 tcgaexp gene=GP5, entrez=2814, pos=chr3:194115550-194119995(-), B=8, L=4, M=4, H=6