DMR 275 chr1:52504501-52504650 (150bp)

DMR Stats
Positionchr1:52504501-52504650 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesTXNDC12 (0bp away)
ANODEV p-value0.0115903605218
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 0.0 (0.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
275 TXNDC12 878 uc001cti.4 chr1 52485804 52521843 - 150 100.0 0.21 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0) 0.0
275 TXNDC12 879 uc031pmo.1 chr1 52497769 52521843 - 150 100.0 0.28 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0) 0.0
275 TXNDC12 879 uc031pmp.1 chr1 52497769 52521843 - 150 100.0 0.21 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0) 0.0
  • 3 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields

Omics Overlaps

Dmrid Omic Set Data Plot
275 cellmeth_recounts PrEC: 0, LNCaP: 0, DU145: 0
275 cellexp id=ENSG00000117862, name=TXNDC12, PrEC=5333, str=7982, LNCaP=3751, str=4143, DU145=5164, str=5041
275 cellexp id=ENSG00000223390, name=RP11-91A18.4, PrEC=1, str=7, LNCaP=1, str=2, DU145=1, str=1
275 tcgaexp gene=TXNDC12, entrez=51060, pos=chr1:52485804-52521843(-), B=3751, L=4013, M=3982, H=3480
275 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305