DMR 27807 chr5:197251-197450 (200bp)

DMR Stats
Positionchr5:197251-197450 (View on UCSC)
Width200bp
Genomic Contextintergenic
Nearest GenesLRRC14B (1782bp away)
ANODEV p-value0.00386463910853
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
27807 chr5 197221 197455 wgEncodeRegDnaseClusteredV2 25 score:497, srow:924688
27807 chr5 197121 197557 wgEncodeRegTfbsClusteredV3 CTCF score:423, expCount:31, expNums:16,24,35,37,39,44,213,463,493,621,630,631,635,636,639,640,641,646,657,658,659,662,664,672,675,676,678,679,682,683,685, expScores:195,144,114,127,112,159,274,142,201,294,166,247,211,158,126,155,113,135,327,230,423,243,386,231,122,165,132,140,215,255,118, srow:3166106
27807 chr5 197231 197400 wgEncodeRegTfbsClusteredV3 CTCFL score:114, expCount:1, expNums:214, expScores:114, srow:3166107
27807 chr5 195324 197323 cpgShore — values(x.gr)[overs$srow, ]:36849
27807 chr5 197324 199323 cpgShelf — values(x.gr)[overs$srow, ]:30986
  • 5 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
27807 cellmeth_recounts PrEC: 0, LNCaP: 4, DU145: 6
27807 cellexp id=ENSG00000164366, name=CCDC127, PrEC=1264, str=3059, LNCaP=1483, str=1396, DU145=2793, str=2475