DMR 27821 chr5:859601-859750 (150bp)

DMR Stats
Positionchr5:859601-859750 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesBRD9 (4099bp away)
ANODEV p-value0.0022050448226
FrequenciesBenign: 2.0 (28.57%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
27821 chr5 859514 859903 wgEncodeRegTfbsClusteredV3 MAX score:209, expCount:1, expNums:223, expScores:209, srow:3167780
27821 chr5 859557 859896 wgEncodeRegTfbsClusteredV3 CHD2 score:520, expCount:1, expNums:479, expScores:520, srow:3167781
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
27821 cellmeth_recounts PrEC: 4, LNCaP: 1, DU145: 19
27821 cellmeth_diffreps_LNCaPvsDU145 A=0, B=13.1, Length=220, Event=Up, log2FC=Inf, padj=0.00251303816158297
27821 cellexp id=ENSG00000028310, name=BRD9, PrEC=3298, str=2948, LNCaP=1857, str=1550, DU145=3168, str=4272
27821 tcgameth site:cg13037462, B=0.53, L=0.68, H=0.59
27821 tcgameth site:cg19863584, B=0.87, L=0.89, H=0.87