DMR 27902 chr5:32712351-32714000 (1650bp)

DMR Stats
Positionchr5:32712351-32714000 (View on UCSC)
Width1650bp
Genomic Contextexon
Nearest GenesNPR3 (0bp away)
ANODEV p-value0.00163166391626
FrequenciesBenign: 0.0 (0.0%), Low: 3.0 (50.0%), High: 4.0 (44.44 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
27902 NPR3 22502 uc003jhu.3 chr5 32711438 32791830 + 1650 100.0 0.07 0 0.0 E1 (18.24), I1 (81.82), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0) 0.0
27902 NPR3 22502 uc003jhv.3 chr5 32711438 32791830 + 1650 100.0 0.07 0 0.0 E1 (18.24), I1 (81.82), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0) 0.0
27902 NPR3 22502 uc003jhw.2 chr5 32710743 32791830 + 1650 100.0 0.12 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0) 0.0
27902 NPR3 22502 uc010iuo.3 chr5 32710743 32783713 + 1650 100.0 0.07 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) 0.0
  • 4 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
27902 chr5 32710406 32714635 wgEncodeRegDnaseClusteredV2 112 score:1000, srow:936570
27902 chr5 32711618 32714204 wgEncodeRegTfbsClusteredV3 EZH2 score:555, expCount:4, expNums:6,15,21,40, expScores:272,320,433,267, srow:3196727
27902 chr5 32711832 32712425 wgEncodeRegTfbsClusteredV3 POLR2A score:285, expCount:2, expNums:61,62, expScores:261,236, srow:3196728
27902 chr5 32712072 32712881 wgEncodeRegTfbsClusteredV3 SUZ12 score:254, expCount:2, expNums:358,578, expScores:221,180, srow:3196730
27902 chr5 32712254 32712913 wgEncodeRegTfbsClusteredV3 SMARCB1 score:205, expCount:1, expNums:391, expScores:205, srow:3196731
27902 chr5 32712657 32713326 wgEncodeRegTfbsClusteredV3 RBBP5 score:188, expCount:1, expNums:8, expScores:188, srow:3196732
27902 chr5 32712738 32713266 wgEncodeRegTfbsClusteredV3 CTCF score:770, expCount:32, expNums:5,16,37,42,44,597,603,635,636,639,640,641,642,643,644,646,657,658,659,660,661,662,669,672,673,674,675,676,682,685,686,687, expScores:165,117,109,98,281,260,152,339,419,390,313,393,253,514,338,770,200,295,198,105,132,341,176,204,165,145,209,204,123,114,176,139, srow:3196733
27902 chr5 32713535 32713790 wgEncodeRegTfbsClusteredV3 CEBPB score:288, expCount:1, expNums:462, expScores:288, srow:3196734
27902 chr5 32713936 32714319 wgEncodeRegTfbsClusteredV3 POLR2A score:279, expCount:1, expNums:632, expScores:279, srow:3196735
27902 chr5 32712399 32712419 tfbsConsSites V$PAX4_01 score:826, zScore:2.17, srow:4038177
27902 chr5 32712401 32712420 tfbsConsSites V$MYCMAX_03 score:781, zScore:1.71, srow:4038178
27902 chr5 32712404 32712413 tfbsConsSites V$HMX1_01 score:837, zScore:2.13, srow:4038179
27902 chr5 32712405 32712416 tfbsConsSites V$NMYC_01 score:872, zScore:1.64, srow:4038180
27902 chr5 32712409 32712427 tfbsConsSites V$AHRARNT_02 score:829, zScore:2.75, srow:4038181
27902 chr5 32712418 32712429 tfbsConsSites V$EGR1_01 score:867, zScore:2.31, srow:4038182
27902 chr5 32712418 32712429 tfbsConsSites V$EGR2_01 score:890, zScore:2.66, srow:4038183
27902 chr5 32712418 32712429 tfbsConsSites V$EGR3_01 score:858, zScore:2.24, srow:4038184
27902 chr5 32712418 32712429 tfbsConsSites V$NGFIC_01 score:867, zScore:2.29, srow:4038185
27902 chr5 32712422 32712441 tfbsConsSites V$YY1_02 score:774, zScore:1.86, srow:4038186
27902 chr5 32712455 32712464 tfbsConsSites V$HLF_01 score:873, zScore:1.81, srow:4038187
27902 chr5 32712539 32712552 tfbsConsSites V$MYCMAX_01 score:808, zScore:1.89, srow:4038188
27902 chr5 32712546 32712566 tfbsConsSites V$STAT1_01 score:757, zScore:1.7, srow:4038189
27902 chr5 32712557 32712571 tfbsConsSites V$SPZ1_01 score:890, zScore:2.11, srow:4038190
27902 chr5 32712562 32712574 tfbsConsSites V$CHOP_01 score:855, zScore:2.24, srow:4038191
27902 chr5 32712564 32712577 tfbsConsSites V$CEBPB_02 score:862, zScore:1.97, srow:4038192
  • Page 1 of 3
  • 25 of 69 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
27902 cellmeth_recounts PrEC: 2, LNCaP: 160, DU145: 135
27902 cellmeth_diffreps_PrECvsLNCaP A=3, B=90, Length=980, Event=Up, log2FC=4.91, padj=0
27902 cellmeth_diffreps_PrECvsLNCaP A=0, B=31, Length=480, Event=Up, log2FC=Inf, padj=4.50368607357446e-09
27902 cellmeth_diffreps_PrECvsLNCaP A=0, B=26, Length=400, Event=Up, log2FC=Inf, padj=1.35542249872291e-07
27902 cellmeth_diffreps_PrECvsDU145 A=1, B=56, Length=680, Event=Up, log2FC=5.81, padj=1.86950950050002e-14
27902 cellmeth_diffreps_PrECvsDU145 A=0, B=21, Length=380, Event=Up, log2FC=Inf, padj=5.26387855513023e-06
27902 cellmeth_diffreps_PrECvsDU145 A=0, B=12, Length=240, Event=Up, log2FC=Inf, padj=0.00174045876043459
27902 cellexp id=ENSG00000113389, name=NPR3, PrEC=18, str=11, LNCaP=5, str=12, DU145=54, str=73
27902 tcgameth site:cg00155526, B=0.18, L=0.5, H=0.44
27902 tcgameth site:cg00266286, B=0.09, L=0.44, H=0.37
27902 tcgameth site:cg11485595, B=0.14, L=0.49, H=0.44
27902 tcgameth site:cg17630392, B=0.29, L=0.54, H=0.47
27902 tcgaexp gene=NPR3, entrez=4883, pos=chr5:32710743-32791830(+), B=359, L=371, M=757, H=385