DMR 27955 chr5:59825851-59826000 (150bp)

DMR Stats
Positionchr5:59825851-59826000 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesPART1 (0bp away)
ANODEV p-value0.0381708161703
FrequenciesBenign: 1.0 (14.29%), Low: 5.0 (83.33%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
27955 PART1 22659 uc003jsg.2 chr5 59783540 59843484 + 150 100.0 0.02 1 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
27955 chr5 59825900 59825911 tfbsConsSites V$NKX3A_01 score:900, zScore:2.47, srow:4084292
27955 chr5 59825941 59825954 tfbsConsSites V$USF_01 score:840, zScore:1.79, srow:4084293
27955 chr5 59825941 59825954 tfbsConsSites V$MYCMAX_01 score:811, zScore:1.93, srow:4084294
27955 chr5 59825854 59825861 phastConsElements100way lod=15 score:262, srow:7029329
27955 chr5 59825897 59825915 phastConsElements100way lod=31 score:333, srow:7029330
27955 chr5 59825923 59825938 phastConsElements100way lod=32 score:337, srow:7029331
27955 chr5 59825943 59825974 phastConsElements100way lod=74 score:420, srow:7029332
  • 7 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
27955 cellmeth_recounts PrEC: 4, LNCaP: 0, DU145: 5
27955 cellexp id=ENSG00000152931, name=PART1, PrEC=92, str=32, LNCaP=166, str=353, DU145=3, str=0
27955 tcgaexp gene=PART1, entrez=25859, pos=chr5:59783540-59843484(+), B=2854, L=3987, M=4433, H=3007