DMR 28089 chr5:126204751-126205200 (450bp)

DMR Stats
Positionchr5:126204751-126205200 (View on UCSC)
Width450bp
Genomic Contextexon
Nearest GenesMARCH3 (0bp away)
ANODEV p-value3.4700262939e-08
FrequenciesBenign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
28089 MARCH3 23031 uc003kuf.4 chr5 126203406 126366500 - 450 100.0 0.01 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (100) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
28089 chr5 126204686 126205155 wgEncodeRegDnaseClusteredV2 69 score:651, srow:966658
28089 chr5 126204812 126205301 wgEncodeRegTfbsClusteredV3 TAF1 score:289, expCount:1, expNums:157, expScores:289, srow:3303795
28089 chr5 126204822 126205185 wgEncodeRegTfbsClusteredV3 ELF1 score:196, expCount:1, expNums:88, expScores:196, srow:3303796
28089 chr5 126204878 126205153 wgEncodeRegTfbsClusteredV3 EGR1 score:258, expCount:3, expNums:87,138,216, expScores:258,170,156, srow:3303797
28089 chr5 126204969 126205140 wgEncodeRegTfbsClusteredV3 POLR2A score:310, expCount:1, expNums:147, expScores:310, srow:3303798
28089 chr5 126204746 126204754 tfbsConsSites V$AREB6_04 score:954, zScore:1.75, srow:4219501
28089 chr5 126204883 126204894 tfbsConsSites V$IK2_01 score:943, zScore:1.89, srow:4219502
28089 chr5 126204927 126204939 tfbsConsSites V$RORA1_01 score:925, zScore:2.65, srow:4219503
28089 chr5 126204927 126204939 tfbsConsSites V$RORA2_01 score:936, zScore:3.33, srow:4219504
28089 chr5 126204996 126205007 tfbsConsSites V$EGR2_01 score:866, zScore:2.29, srow:4219505
28089 chr5 126204996 126205007 tfbsConsSites V$EGR3_01 score:821, zScore:1.69, srow:4219506
28089 chr5 126204996 126205007 tfbsConsSites V$NGFIC_01 score:879, zScore:2.48, srow:4219507
28089 chr5 126204800 126204805 phastConsElements100way lod=18 score:280, srow:7257074
28089 chr5 126204903 126204908 phastConsElements100way lod=19 score:285, srow:7257075
28089 chr5 126204928 126204951 phastConsElements100way lod=89 score:438, srow:7257076
28089 chr5 126205004 126205008 phastConsElements100way lod=17 score:274, srow:7257077
28089 chr5 126205130 126205138 phastConsElements100way lod=15 score:262, srow:7257078
28089 chr5 126205169 126205185 phastConsElements100way lod=25 score:312, srow:7257079
28089 chr5 126205195 126205210 phastConsElements100way lod=40 score:359, srow:7257080
  • 19 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
28089 cellmeth_recounts PrEC: 1, LNCaP: 6, DU145: 4
28089 cellexp id=ENSG00000173926, name=MARCH3, PrEC=31, str=25, LNCaP=169, str=183, DU145=277, str=251
28089 tcgameth site:cg06918474, B=0.22, L=0.62, H=0.56
28089 tcgameth site:cg23155911, B=0.24, L=0.61, H=0.57
28089 tcgameth site:cg25568066, B=0.18, L=0.62, H=0.58
28089 tcgaexp gene=MARCH3, entrez=115123, pos=chr5:126203406-126366500(-), B=108, L=172, M=157, H=190