DMR 28097 chr5:128795301-128795500 (200bp)

DMR Stats
Positionchr5:128795301-128795500 (View on UCSC)
Width200bp
Genomic Contextpromoter
Nearest GenesADAMTS19 (602bp away)
ANODEV p-value0.0119693570521
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
28097 chr5 128795181 128795435 wgEncodeRegDnaseClusteredV2 9 score:811, srow:967531
28097 chr5 128795466 128796635 wgEncodeRegDnaseClusteredV2 93 score:1000, srow:967532
28097 chr5 128795042 128795697 wgEncodeRegTfbsClusteredV3 E2F1 score:468, expCount:1, expNums:572, expScores:468, srow:3306414
28097 chr5 128795105 128795428 wgEncodeRegTfbsClusteredV3 SP1 score:176, expCount:1, expNums:153, expScores:176, srow:3306415
28097 chr5 128795174 128795891 wgEncodeRegTfbsClusteredV3 POLR2A score:707, expCount:6, expNums:146,147,610,632,633,634, expScores:265,298,322,471,518,227, srow:3306416
28097 chr5 128795176 128795519 wgEncodeRegTfbsClusteredV3 MXI1 score:177, expCount:1, expNums:353, expScores:177, srow:3306417
28097 chr5 128795181 128795510 wgEncodeRegTfbsClusteredV3 MAX score:592, expCount:1, expNums:352, expScores:592, srow:3306418
28097 chr5 128795189 128795564 wgEncodeRegTfbsClusteredV3 TBP score:350, expCount:1, expNums:359, expScores:350, srow:3306419
28097 chr5 128795191 128795466 wgEncodeRegTfbsClusteredV3 USF2 score:357, expCount:1, expNums:360, expScores:357, srow:3306420
28097 chr5 128795196 128795716 wgEncodeRegTfbsClusteredV3 MYC score:702, expCount:4, expNums:347,623,624,626, expScores:356,458,354,325, srow:3306421
28097 chr5 128795209 128795538 wgEncodeRegTfbsClusteredV3 CHD2 score:181, expCount:1, expNums:345, expScores:181, srow:3306422
28097 chr5 128795230 128795406 wgEncodeRegTfbsClusteredV3 USF1 score:869, expCount:1, expNums:161, expScores:869, srow:3306423
28097 chr5 128795248 128795617 wgEncodeRegTfbsClusteredV3 TAF1 score:485, expCount:1, expNums:157, expScores:485, srow:3306424
28097 chr5 128795335 128796423 wgEncodeRegTfbsClusteredV3 RBBP5 score:266, expCount:1, expNums:8, expScores:258, srow:3306425
28097 chr5 128795460 128795763 wgEncodeRegTfbsClusteredV3 FOXP2 score:160, expCount:1, expNums:251, expScores:160, srow:3306426
28097 chr5 128795302 128795314 tfbsConsSites V$AREB6_01 score:954, zScore:2.9, srow:4225089
28097 chr5 128795303 128795313 tfbsConsSites V$SREBP1_01 score:894, zScore:2.37, srow:4225090
28097 chr5 128795345 128795364 tfbsConsSites V$MYCMAX_03 score:830, zScore:2.37, srow:4225091
28097 chr5 128795347 128795362 tfbsConsSites V$ARNT_01 score:922, zScore:3.1, srow:4225092
28097 chr5 128795347 128795362 tfbsConsSites V$E47_02 score:903, zScore:2.12, srow:4225093
28097 chr5 128795347 128795363 tfbsConsSites V$XBP1_01 score:804, zScore:2.08, srow:4225094
28097 chr5 128795348 128795361 tfbsConsSites V$MYCMAX_01 score:871, zScore:2.81, srow:4225095
28097 chr5 128795349 128795360 tfbsConsSites V$NMYC_01 score:899, zScore:2.02, srow:4225096
28097 chr5 128795351 128795358 tfbsConsSites V$USF_C score:943, zScore:1.88, srow:4225097
28097 chr5 128795366 128795386 tfbsConsSites V$PPARG_01 score:805, zScore:3.07, srow:4225098
  • Page 1 of 2
  • 25 of 34 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
28097 cellmeth_recounts PrEC: 7, LNCaP: 5, DU145: 18
28097 cellexp id=ENSG00000249421, name=ADAMTS19-AS1, PrEC=1, str=0, LNCaP=1, str=0, DU145=4, str=1
28097 tcgameth site:cg13701109, B=0.22, L=0.36, H=0.3