DMR 29203 chr7:28996751-28998550 (1800bp)

DMR Stats
Positionchr7:28996751-28998550 (View on UCSC)
Width1800bp
Genomic Contextpromoter
Nearest GenesTRIL (0bp away)
ANODEV p-value0.00185424688435
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 5.0 (55.56 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
29203 TRIL 26799 uc003szt.3 chr7 28992974 28998029 - 1279 71.06 0.03 0 56.72 E1 (23.89), I1 (0.17), E2 (5.5), I2 (0.11), E3 (41.5) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
29203 chr7 28996221 28998455 wgEncodeRegDnaseClusteredV2 111 score:1000, srow:1082965
29203 chr7 28995298 28998241 wgEncodeRegTfbsClusteredV3 EZH2 score:599, expCount:9, expNums:6,15,17,19,21,36,38,40,43, expScores:272,252,193,107,457,254,197,306,402, srow:3739153
29203 chr7 28996314 28996763 wgEncodeRegTfbsClusteredV3 GATA2 score:1000, expCount:2, expNums:459,586, expScores:134,1000, srow:3739188
29203 chr7 28996364 28996847 wgEncodeRegTfbsClusteredV3 GATA3 score:1000, expCount:3, expNums:272,571,587, expScores:1000,540,483, srow:3739190
29203 chr7 28996531 28996840 wgEncodeRegTfbsClusteredV3 MYC score:192, expCount:1, expNums:626, expScores:192, srow:3739192
29203 chr7 28996606 28996819 wgEncodeRegTfbsClusteredV3 E2F1 score:733, expCount:1, expNums:572, expScores:733, srow:3739193
29203 chr7 28996684 28996883 wgEncodeRegTfbsClusteredV3 CTCF score:190, expCount:1, expNums:627, expScores:190, srow:3739194
29203 chr7 28996828 28997157 wgEncodeRegTfbsClusteredV3 MAX score:177, expCount:1, expNums:352, expScores:177, srow:3739195
29203 chr7 28996890 28997559 wgEncodeRegTfbsClusteredV3 RBBP5 score:215, expCount:1, expNums:8, expScores:215, srow:3739196
29203 chr7 28997348 28997747 wgEncodeRegTfbsClusteredV3 CTCF score:362, expCount:9, expNums:5,20,137,609,639,642,661,677,687, expScores:121,105,208,110,135,128,203,155,362, srow:3739197
29203 chr7 28997627 28998036 wgEncodeRegTfbsClusteredV3 GATA2 score:196, expCount:1, expNums:586, expScores:196, srow:3739198
29203 chr7 28997881 28998210 wgEncodeRegTfbsClusteredV3 EP300 score:143, expCount:1, expNums:273, expScores:143, srow:3739199
29203 chr7 28997903 28998198 wgEncodeRegTfbsClusteredV3 GATA3 score:211, expCount:1, expNums:272, expScores:211, srow:3739200
29203 chr7 28997925 28998066 wgEncodeRegTfbsClusteredV3 SP1 score:406, expCount:1, expNums:153, expScores:406, srow:3739201
29203 chr7 28997945 28998408 wgEncodeRegTfbsClusteredV3 POLR2A score:309, expCount:1, expNums:78, expScores:309, srow:3739202
29203 chr7 28997966 28998035 wgEncodeRegTfbsClusteredV3 JUND score:442, expCount:1, expNums:142, expScores:442, srow:3739203
29203 chr7 28998034 28998337 wgEncodeRegTfbsClusteredV3 FOXP2 score:255, expCount:1, expNums:251, expScores:255, srow:3739204
29203 chr7 28998106 28998375 wgEncodeRegTfbsClusteredV3 REST score:177, expCount:1, expNums:257, expScores:177, srow:3739205
29203 chr7 28998212 28998527 wgEncodeRegTfbsClusteredV3 EP300 score:207, expCount:1, expNums:263, expScores:207, srow:3739206
29203 chr7 28998213 28998436 wgEncodeRegTfbsClusteredV3 CTCF score:130, expCount:1, expNums:687, expScores:130, srow:3739207
29203 chr7 28998396 28998899 wgEncodeRegTfbsClusteredV3 EZH2 score:272, expCount:1, expNums:15, expScores:272, srow:3739208
29203 chr7 28998449 28998688 wgEncodeRegTfbsClusteredV3 CTCF score:157, expCount:1, expNums:267, expScores:157, srow:3739209
29203 chr7 28996757 28996769 tfbsConsSites V$CEBP_01 score:905, zScore:1.87, srow:4800614
29203 chr7 28996886 28996913 tfbsConsSites V$PAX5_02 score:786, zScore:2.08, srow:4800615
29203 chr7 28996889 28996908 tfbsConsSites V$P53_01 score:678, zScore:1.76, srow:4800616
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  • 25 of 162 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
29203 cellmeth_recounts PrEC: 5, LNCaP: 929, DU145: 55
29203 cellmeth_diffreps_PrECvsLNCaP A=7, B=878, Length=2640, Event=Up, log2FC=6.97, padj=0
29203 cellmeth_diffreps_PrECvsDU145 A=0, B=15, Length=260, Event=Up, log2FC=Inf, padj=0.000269565104641442
29203 cellmeth_diffreps_LNCaPvsDU145 A=938.62, B=41.16, Length=2580, Event=Down, log2FC=-4.51, padj=0
29203 cellexp id=ENSG00000176734, name=TRIL, PrEC=0, str=0, LNCaP=0, str=0, DU145=0, str=0
29203 cellexp id=ENSG00000228421, name=AC005013.5, PrEC=0, str=0, LNCaP=0, str=0, DU145=0, str=0
29203 cellexp id=ENSG00000255690, name=AC005013.1, PrEC=0, str=0, LNCaP=0, str=0, DU145=0, str=0
29203 tcgameth site:cg02624770, B=0.14, L=0.22, H=0.29
29203 tcgameth site:cg04823311, B=0.02, L=0.16, H=0.28
29203 tcgameth site:cg07702750, B=0.05, L=0.42, H=0.38
29203 tcgameth site:cg13560901, B=0.26, L=0.52, H=0.48
29203 tcgameth site:cg14709460, B=0.02, L=0.19, H=0.23
29203 tcgameth site:cg14996783, B=0.04, L=0.1, H=0.24
29203 tcgameth site:cg19929126, B=0.05, L=0.43, H=0.4
29203 tcgameth site:cg21572621, B=0.06, L=0.15, H=0.21
29203 tcgameth site:cg22348673, B=0.09, L=0.18, H=0.28
29203 tcgameth site:cg22675801, B=0.18, L=0.45, H=0.42
29203 tcgameth site:cg24853724, B=0.15, L=0.24, H=0.32
29203 tcgaexp gene=TRIL, entrez=9865, pos=chr7:28992974-28998029(-), B=414, L=300, M=292, H=405