DMR 29599 chr7:152622051-152622250 (200bp)

DMR Stats
Positionchr7:152622051-152622250 (View on UCSC)
Width200bp
Genomic Contextintergenic
Nearest GenesACTR3B (69586bp away)
ANODEV p-value0.0023598919976
FrequenciesBenign: 0.0 (0.0%), Low: 6.0 (100.0%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
29599 chr7 152621881 152623355 wgEncodeRegDnaseClusteredV2 43 score:1000, srow:1132534
29599 chr7 152621876 152622205 wgEncodeRegTfbsClusteredV3 CHD2 score:183, expCount:1, expNums:345, expScores:183, srow:3910828
29599 chr7 152621943 152622352 wgEncodeRegTfbsClusteredV3 EZH2 score:213, expCount:1, expNums:25, expScores:213, srow:3910829
29599 chr7 152621917 152622149 cpgIsland CpG: 20 length:233, cpgNum:20, gcNum:153, perCpg:17.2, perGc:65.7, obsExp:0.81, srow:25082
29599 chr7 152622150 152622343 cpgShore — values(x.gr)[overs$srow, ]:45401
  • 5 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
29599 cellmeth_recounts PrEC: 9, LNCaP: 3, DU145: 8
29599 cellmeth_diffreps_PrECvsLNCaP A=80, B=3, Length=480, Event=Down, log2FC=-4.74, padj=0
29599 cellmeth_diffreps_PrECvsDU145 A=80, B=10, Length=400, Event=Down, log2FC=-3, padj=5.45210073349688e-13
29599 tcgameth site:cg17403699, B=0.56, L=0.71, H=0.66