DMR 29893 chr8:49468251-49469100 (850bp)

DMR Stats
Positionchr8:49468251-49469100 (View on UCSC)
Width850bp
Genomic Contextintergenic
Nearest GenesEFCAB1 (154250bp away)
ANODEV p-value4.33801143155e-12
FrequenciesBenign: 0.0 (0.0%), Low: 2.0 (33.33%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
29893 chr8 49467706 49468655 wgEncodeRegDnaseClusteredV2 63 score:1000, srow:1158857
29893 chr8 49468761 49469470 wgEncodeRegDnaseClusteredV2 67 score:490, srow:1158858
29893 chr8 49468165 49468421 wgEncodeRegTfbsClusteredV3 RAD21 score:240, expCount:3, expNums:149,264,355, expScores:226,240,196, srow:3985957
29893 chr8 49468733 49469096 wgEncodeRegTfbsClusteredV3 CTCF score:130, expCount:2, expNums:642,661, expScores:130,122, srow:3985958
29893 chr8 49468766 49469189 wgEncodeRegTfbsClusteredV3 FOXP2 score:168, expCount:2, expNums:251,255, expScores:168,147, srow:3985959
29893 chr8 49468782 49469245 wgEncodeRegTfbsClusteredV3 POLR2A score:191, expCount:2, expNums:206,599, expScores:191,139, srow:3985960
29893 chr8 49468783 49469022 wgEncodeRegTfbsClusteredV3 USF1 score:135, expCount:1, expNums:265, expScores:135, srow:3985961
29893 chr8 49468827 49469270 wgEncodeRegTfbsClusteredV3 GATA2 score:227, expCount:1, expNums:459, expScores:227, srow:3985962
29893 chr8 49468917 49469316 wgEncodeRegTfbsClusteredV3 FOS score:254, expCount:1, expNums:457, expScores:254, srow:3985963
29893 chr8 49468264 49468275 tfbsConsSites V$IK2_01 score:953, zScore:2.07, srow:5105197
29893 chr8 49468310 49468324 tfbsConsSites V$OCT1_Q6 score:855, zScore:2.03, srow:5105198
29893 chr8 49468320 49468348 tfbsConsSites V$MYOGNF1_01 score:733, zScore:1.64, srow:5105199
29893 chr8 49468339 49468354 tfbsConsSites V$GRE_C score:861, zScore:2.72, srow:5105200
29893 chr8 49468339 49468354 tfbsConsSites V$TAL1ALPHAE47_01 score:889, zScore:2.13, srow:5105201
29893 chr8 49468339 49468354 tfbsConsSites V$TAL1BETAITF2_01 score:863, zScore:2.01, srow:5105202
29893 chr8 49468341 49468352 tfbsConsSites V$MYOD_01 score:941, zScore:2.57, srow:5105203
29893 chr8 49468342 49468351 tfbsConsSites V$AP4_Q6 score:941, zScore:1.72, srow:5105204
29893 chr8 49468367 49468375 tfbsConsSites V$STAT_01 score:918, zScore:1.95, srow:5105205
29893 chr8 49468470 49468481 tfbsConsSites V$SRY_02 score:890, zScore:1.89, srow:5105206
29893 chr8 49468489 49468501 tfbsConsSites V$OCT1_03 score:881, zScore:1.92, srow:5105207
29893 chr8 49468490 49468504 tfbsConsSites V$HNF1_01 score:798, zScore:1.67, srow:5105208
29893 chr8 49468496 49468511 tfbsConsSites V$S8_01 score:893, zScore:2.35, srow:5105209
29893 chr8 49468497 49468507 tfbsConsSites V$PAX4_02 score:926, zScore:2.57, srow:5105210
29893 chr8 49468497 49468510 tfbsConsSites V$CHX10_01 score:827, zScore:2.12, srow:5105211
29893 chr8 49468573 49468587 tfbsConsSites V$CDPCR3_01 score:822, zScore:2.42, srow:5105212
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Omics Overlaps

Dmrid Omic Set Data Plot
29893 cellmeth_recounts PrEC: 3, LNCaP: 396, DU145: 28
29893 cellmeth_diffreps_PrECvsLNCaP A=4, B=318, Length=1100, Event=Up, log2FC=6.31, padj=0
29893 cellmeth_diffreps_LNCaPvsDU145 A=35.28, B=0.94, Length=400, Event=Down, log2FC=-5.24, padj=4.08953502356965e-08
29893 cellmeth_diffreps_LNCaPvsDU145 A=304.68, B=18.71, Length=660, Event=Down, log2FC=-4.03, padj=0
29893 cellexp id=ENSG00000253608, name=RP11-770E5.1, PrEC=8, str=27, LNCaP=0, str=0, DU145=0, str=0
29893 cellexp id=ENSG00000253688, name=RP11-567J20.2, PrEC=1, str=0, LNCaP=0, str=0, DU145=0, str=0
29893 tcgameth site:cg04920358, B=0.07, L=0.47, H=0.4
29893 tcgameth site:cg10826197, B=0.03, L=0.33, H=0.38
29893 tcgameth site:cg14095438, B=0.16, L=0.56, H=0.51
29893 tcgameth site:cg14907769, B=0.18, L=0.62, H=0.57
29893 tcgameth site:cg18991611, B=0.07, L=0.59, H=0.54
29893 tcgameth site:cg19414967, B=0.33, L=0.67, H=0.66
29893 tcgameth site:cg20527270, B=0.1, L=0.67, H=0.56
29893 tcgameth site:cg27038634, B=0.27, L=0.55, H=0.55