DMR 30153 chr8:144098251-144098400 (150bp)

DMR Stats
Positionchr8:144098251-144098400 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesLOC100133669 (0bp away)
ANODEV p-value0.037546125372
FrequenciesBenign: 2.0 (28.57%), Low: 5.0 (83.33%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
30153 LOC100133669 29006 uc003yxl.4 chr8 144089182 144099807 - 150 100.0 0.16 1 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0) 0.0
30153 LOC100133669 29006 uc011ljz.1 chr8 144063448 144099807 - 150 100.0 0.16 0 0.0 E1 (0), I1 (100), E2 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
30153 chr8 144098074 144098289 wgEncodeRegTfbsClusteredV3 MEF2A score:124, expCount:1, expNums:224, expScores:124, srow:4102562
30153 chr8 144097457 144099456 cpgShore — values(x.gr)[overs$srow, ]:47271
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
30153 cellmeth_recounts PrEC: 15, LNCaP: 103, DU145: 13
30153 cellmeth_diffreps_PrECvsLNCaP A=62, B=214, Length=1040, Event=Up, log2FC=1.79, padj=0
30153 cellmeth_diffreps_PrECvsDU145 A=62, B=13, Length=380, Event=Down, log2FC=-2.25, padj=3.37153913204325e-07
30153 cellmeth_diffreps_LNCaPvsDU145 A=228.78, B=13.1, Length=1020, Event=Down, log2FC=-4.13, padj=0
30153 cellexp id=ENSG00000247317, name=RP11-273G15.2, PrEC=18, str=11, LNCaP=98, str=49, DU145=142, str=60
30153 tcgaexp gene=LOC100133669, entrez=100133669, pos=chr8:144063448-144099807(-), B=15, L=10, M=7, H=8