DMR 30175 chr8:145103251-145105700 (2450bp)

DMR Stats
Positionchr8:145103251-145105700 (View on UCSC)
Width2450bp
Genomic Context3' end
Nearest GenesOPLAH (466bp away)
ANODEV p-value5.68058079143e-05
FrequenciesBenign: 0.0 (0.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
30175 chr8 145103241 145103395 wgEncodeRegDnaseClusteredV2 6 score:460, srow:1197230
30175 chr8 145103406 145104075 wgEncodeRegDnaseClusteredV2 22 score:401, srow:1197231
30175 chr8 145104106 145105115 wgEncodeRegDnaseClusteredV2 47 score:873, srow:1197232
30175 chr8 145105306 145106495 wgEncodeRegDnaseClusteredV2 37 score:1000, srow:1197233
30175 chr8 145102668 145107425 wgEncodeRegTfbsClusteredV3 EZH2 score:1000, expCount:9, expNums:6,15,17,19,21,36,38,40,43, expScores:415,673,157,125,346,219,280,214,471, srow:4107333
30175 chr8 145103010 145103872 wgEncodeRegTfbsClusteredV3 POLR2A score:223, expCount:3, expNums:61,525,564, expScores:223,188,166, srow:4107334
30175 chr8 145103634 145104089 wgEncodeRegTfbsClusteredV3 CCNT2 score:124, expCount:1, expNums:476, expScores:124, srow:4107335
30175 chr8 145104113 145104296 wgEncodeRegTfbsClusteredV3 CTCF score:142, expCount:1, expNums:635, expScores:142, srow:4107336
30175 chr8 145104114 145104457 wgEncodeRegTfbsClusteredV3 GABPA score:182, expCount:1, expNums:140, expScores:182, srow:4107337
30175 chr8 145104397 145104852 wgEncodeRegTfbsClusteredV3 CCNT2 score:146, expCount:1, expNums:476, expScores:146, srow:4107338
30175 chr8 145104489 145104918 wgEncodeRegTfbsClusteredV3 POLR2A score:233, expCount:1, expNums:61, expScores:233, srow:4107339
30175 chr8 145104568 145104823 wgEncodeRegTfbsClusteredV3 REST score:527, expCount:2, expNums:144,258, expScores:527,219, srow:4107340
30175 chr8 145104646 145104921 wgEncodeRegTfbsClusteredV3 CTCF score:123, expCount:1, expNums:642, expScores:123, srow:4107341
30175 chr8 145104877 145105582 wgEncodeRegTfbsClusteredV3 TAF1 score:232, expCount:1, expNums:157, expScores:202, srow:4107342
30175 chr8 145105318 145105927 wgEncodeRegTfbsClusteredV3 SP4 score:261, expCount:1, expNums:155, expScores:261, srow:4107343
30175 chr8 145105378 145105787 wgEncodeRegTfbsClusteredV3 POLR2A score:296, expCount:1, expNums:146, expScores:296, srow:4107344
30175 chr8 145105552 145105848 wgEncodeRegTfbsClusteredV3 ZNF263 score:578, expCount:1, expNums:368, expScores:578, srow:4107345
30175 chr8 145103890 145103905 tfbsConsSites V$ELK1_01 score:836, zScore:1.64, srow:5279420
30175 chr8 145103897 145103916 tfbsConsSites V$MYCMAX_03 score:778, zScore:1.67, srow:5279421
30175 chr8 145103900 145103913 tfbsConsSites V$USF_01 score:865, zScore:2.15, srow:5279422
30175 chr8 145103900 145103913 tfbsConsSites V$MYCMAX_01 score:822, zScore:2.09, srow:5279423
30175 chr8 145104063 145104078 tfbsConsSites V$ARP1_01 score:810, zScore:2.09, srow:5279424
30175 chr8 145104124 145104144 tfbsConsSites V$PAX6_01 score:768, zScore:1.93, srow:5279425
30175 chr8 145104268 145104275 tfbsConsSites V$E2F_02 score:922, zScore:2.43, srow:5279426
30175 chr8 145104382 145104403 tfbsConsSites V$OLF1_01 score:805, zScore:1.85, srow:5279427
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Omics Overlaps

Dmrid Omic Set Data Plot
30175 cellmeth_recounts PrEC: 405, LNCaP: 7449, DU145: 32
30175 cellmeth_diffreps_PrECvsLNCaP A=1347, B=7268, Length=3640, Event=Up, log2FC=2.43, padj=0
30175 cellmeth_diffreps_PrECvsDU145 A=72, B=9, Length=680, Event=Down, log2FC=-3, padj=1.13918478668355e-11
30175 cellmeth_diffreps_PrECvsDU145 A=3186, B=137, Length=4320, Event=Down, log2FC=-4.54, padj=0
30175 cellmeth_diffreps_LNCaPvsDU145 A=9752.9, B=140.31, Length=5460, Event=Down, log2FC=-6.12, padj=0
30175 cellexp id=ENSG00000204791, name=CTD-3065J16.6, PrEC=8, str=0, LNCaP=48, str=9, DU145=25, str=2
30175 tcgameth site:cg01193217, B=0.27, L=0.45, H=0.49
30175 tcgameth site:cg01760475, B=0.24, L=0.58, H=0.63
30175 tcgameth site:cg04594598, B=0.41, L=0.56, H=0.58
30175 tcgameth site:cg11125037, B=0.45, L=0.55, H=0.57
30175 tcgameth site:cg11133524, B=0.23, L=0.54, H=0.59
30175 tcgameth site:cg20803796, B=0.34, L=0.59, H=0.64
30175 tcgameth site:cg20938454, B=0.38, L=0.5, H=0.5
30175 tcgameth site:cg24064055, B=0.26, L=0.48, H=0.54
30175 tcgameth site:cg25223771, B=0.46, L=0.62, H=0.62