DMR 30191 chr9:116751-117150 (400bp)

DMR Stats
Positionchr9:116751-117150 (View on UCSC)
Width400bp
Genomic Context3' end
Nearest GenesFOXD4 (0bp away)
ANODEV p-value0.000252511502661
FrequenciesBenign: 0.0 (0.0%), Low: 3.0 (50.0%), High: 3.0 (33.33 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
30191 FOXD4 29107 uc003zfz.4 chr9 116231 118417 - 400 100.0 0.06 0 0.0 E1 (100) 100.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
30191 chr9 116761 117035 wgEncodeRegDnaseClusteredV2 13 score:360, srow:1198078
30191 chr9 116265 118599 wgEncodeRegTfbsClusteredV3 EZH2 score:515, expCount:6, expNums:6,21,36,38,40,43, expScores:266,504,228,218,241,262, srow:4111683
30191 chr9 116857 116870 tfbsConsSites V$NFKB_Q6 score:850, zScore:2.09, srow:5283198
30191 chr9 116951 116960 tfbsConsSites V$MYOD_Q6 score:997, zScore:2.23, srow:5283199
30191 chr9 117064 117078 tfbsConsSites V$E47_01 score:875, zScore:1.96, srow:5283200
30191 chr9 116800 116800 cosmic COSM304715 srow:1177933
30191 chr9 116920 116920 cosmic COSM1459124 srow:1177934
30191 chr9 116920 116920 cosmic COSM1459125 srow:1177935
30191 chr9 116946 116946 cosmic COSM1104350 srow:1177936
30191 chr9 116946 116946 cosmic COSM1104351 srow:1177937
30191 chr9 116962 116962 cosmic COSM109656 srow:1177938
30191 chr9 116972 116972 cosmic COSM1104353 srow:1177939
30191 chr9 116972 116972 cosmic COSM177901 srow:1177940
30191 chr9 117000 117000 cosmic COSM1104354 srow:1177941
30191 chr9 117000 117000 cosmic COSM1104355 srow:1177942
30191 chr9 117019 117019 cosmic COSM1459126 srow:1177943
30191 chr9 117019 117019 cosmic COSM1459127 srow:1177944
30191 chr9 117146 117146 cosmic COSM1104407 srow:1177945
30191 chr9 117146 117146 cosmic COSM1104408 srow:1177946
30191 chr9 116951 116958 phastConsElements100way lod=15 score:262, srow:9110727
30191 chr9 117024 117027 phastConsElements100way lod=14 score:255, srow:9110728
30191 chr9 117045 117050 phastConsElements100way lod=17 score:274, srow:9110729
30191 chr9 117057 117058 phastConsElements100way lod=14 score:255, srow:9110730
30191 chr9 117064 117085 phastConsElements100way lod=68 score:411, srow:9110731
30191 chr9 117139 117145 phastConsElements100way lod=39 score:356, srow:9110732
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Omics Overlaps

Dmrid Omic Set Data Plot
30191 cellmeth_recounts PrEC: 2, LNCaP: 96, DU145: 5
30191 cellmeth_diffreps_PrECvsLNCaP A=3, B=87, Length=760, Event=Up, log2FC=4.86, padj=0
30191 cellmeth_diffreps_LNCaPvsDU145 A=93.01, B=4.68, Length=660, Event=Down, log2FC=-4.31, padj=0
30191 cellexp id=ENSG00000170122, name=FOXD4, PrEC=3, str=21, LNCaP=465, str=274, DU145=47, str=57
30191 tcgaexp gene=FOXD4, entrez=2298, pos=chr9:116231-118417(-), B=18, L=37, M=34, H=39