DMR 30192 chr9:117501-118300 (800bp)

DMR Stats
Positionchr9:117501-118300 (View on UCSC)
Width800bp
Genomic Contextpromoter
Nearest GenesFOXD4 (0bp away)
ANODEV p-value1.52478218464e-05
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 5.0 (55.56 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
30192 FOXD4 29107 uc003zfz.4 chr9 116231 118417 - 800 100.0 0.06 0 47.88 E1 (100) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
30192 chr9 117481 117815 wgEncodeRegDnaseClusteredV2 11 score:243, srow:1198079
30192 chr9 118001 118330 wgEncodeRegDnaseClusteredV2 6 score:115, srow:1198080
30192 chr9 116265 118599 wgEncodeRegTfbsClusteredV3 EZH2 score:515, expCount:6, expNums:6,21,36,38,40,43, expScores:266,504,228,218,241,262, srow:4111683
30192 chr9 117546 117565 tfbsConsSites V$P53_01 score:676, zScore:1.73, srow:5283205
30192 chr9 117552 117567 tfbsConsSites V$GRE_C score:810, zScore:1.7, srow:5283206
30192 chr9 117556 117575 tfbsConsSites V$P53_01 score:722, zScore:2.53, srow:5283207
30192 chr9 117557 117585 tfbsConsSites V$MYOGNF1_01 score:737, zScore:1.71, srow:5283208
30192 chr9 117569 117578 tfbsConsSites V$SP1_01 score:956, zScore:2.11, srow:5283209
30192 chr9 117571 117591 tfbsConsSites V$PPARG_01 score:741, zScore:1.94, srow:5283210
30192 chr9 117573 117588 tfbsConsSites V$ARP1_01 score:795, zScore:1.79, srow:5283211
30192 chr9 117590 117604 tfbsConsSites V$ISRE_01 score:781, zScore:1.68, srow:5283212
30192 chr9 117599 117610 tfbsConsSites V$EGR1_01 score:841, zScore:1.88, srow:5283213
30192 chr9 117599 117610 tfbsConsSites V$NGFIC_01 score:842, zScore:1.88, srow:5283214
30192 chr9 117604 117612 tfbsConsSites V$ZIC1_01 score:916, zScore:1.74, srow:5283215
30192 chr9 117609 117626 tfbsConsSites V$AHR_01 score:841, zScore:3, srow:5283216
30192 chr9 117623 117635 tfbsConsSites V$PAX3_01 score:807, zScore:1.89, srow:5283217
30192 chr9 117624 117645 tfbsConsSites V$TCF11MAFG_01 score:755, zScore:1.92, srow:5283218
30192 chr9 117660 117675 tfbsConsSites V$GRE_C score:816, zScore:1.82, srow:5283219
30192 chr9 117677 117691 tfbsConsSites V$E2F_01 score:775, zScore:2.02, srow:5283220
30192 chr9 117679 117686 tfbsConsSites V$MZF1_01 score:970, zScore:1.8, srow:5283221
30192 chr9 117704 117711 tfbsConsSites V$STAT3_02 score:996, zScore:1.87, srow:5283222
30192 chr9 117704 117733 tfbsConsSites V$HOX13_01 score:718, zScore:1.91, srow:5283223
30192 chr9 117727 117736 tfbsConsSites V$GATA2_01 score:937, zScore:1.66, srow:5283224
30192 chr9 117751 117761 tfbsConsSites V$CP2_01 score:890, zScore:1.92, srow:5283225
30192 chr9 117766 117775 tfbsConsSites V$GATA2_01 score:942, zScore:1.75, srow:5283226
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  • 25 of 99 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
30192 cellmeth_recounts PrEC: 24, LNCaP: 193, DU145: 15
30192 cellmeth_diffreps_PrECvsLNCaP A=2, B=89, Length=760, Event=Up, log2FC=5.48, padj=0
30192 cellmeth_diffreps_PrECvsLNCaP A=24, B=56, Length=260, Event=Up, log2FC=1.22, padj=0.008870036705605
30192 cellmeth_diffreps_PrECvsDU145 A=25, B=4, Length=340, Event=Down, log2FC=-2.64, padj=0.00160404022456948
30192 cellmeth_diffreps_PrECvsDU145 A=28, B=3, Length=320, Event=Down, log2FC=-3.22, padj=8.63344400735211e-05
30192 cellmeth_diffreps_LNCaPvsDU145 A=192.43, B=12.16, Length=1280, Event=Down, log2FC=-3.98, padj=0
30192 cellexp id=ENSG00000170122, name=FOXD4, PrEC=3, str=21, LNCaP=465, str=274, DU145=47, str=57
30192 tcgameth site:cg18016181, B=0.24, L=0.58, H=0.59
30192 tcgameth site:cg25391162, B=0.5, L=0.64, H=0.64
30192 tcgaexp gene=FOXD4, entrez=2298, pos=chr9:116231-118417(-), B=18, L=37, M=34, H=39