DMR 30253 chr9:23824051-23824600 (550bp)

DMR Stats
Positionchr9:23824051-23824600 (View on UCSC)
Width550bp
Genomic Contextintron
Nearest GenesELAVL2 (0bp away)
ANODEV p-value7.90743699435e-09
FrequenciesBenign: 0.0 (0.0%), Low: 2.0 (33.33%), High: 5.0 (55.56 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
30253 ELAVL2 29241 uc003zpu.3 chr9 23690103 23826063 - 550 100.0 0.17 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0) 0.0
30253 ELAVL2 29241 uc003zpv.3 chr9 23690103 23826063 - 550 100.0 0.4 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0) 0.0
30253 ELAVL2 29241 uc003zpw.3 chr9 23690103 23826063 - 550 100.0 0.17 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) 0.0
  • 3 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
30253 chr9 23824421 23824635 wgEncodeRegDnaseClusteredV2 6 score:227, srow:1205800
30253 chr9 23823709 23824586 wgEncodeRegTfbsClusteredV3 EZH2 score:296, expCount:1, expNums:40, expScores:211, srow:4134324
30253 chr9 23823967 23824210 wgEncodeRegTfbsClusteredV3 REST score:193, expCount:1, expNums:144, expScores:193, srow:4134325
30253 chr9 23824089 23825442 wgEncodeRegTfbsClusteredV3 SUZ12 score:204, expCount:1, expNums:578, expScores:138, srow:4134326
30253 chr9 23824197 23824214 tfbsConsSites V$IRF7_01 score:828, zScore:2.26, srow:5340598
30253 chr9 23824268 23824284 tfbsConsSites V$XBP1_01 score:798, zScore:1.97, srow:5340599
30253 chr9 23824286 23824302 tfbsConsSites V$RFX1_01 score:912, zScore:3.39, srow:5340600
30253 chr9 23824293 23824308 tfbsConsSites V$ARNT_01 score:918, zScore:3.04, srow:5340601
30253 chr9 23824295 23824306 tfbsConsSites V$MYCMAX_02 score:882, zScore:1.8, srow:5340602
30253 chr9 23824306 23824320 tfbsConsSites V$HNF1_01 score:814, zScore:1.95, srow:5340603
30253 chr9 23824310 23824320 tfbsConsSites V$POU6F1_01 score:942, zScore:3.37, srow:5340604
30253 chr9 23824460 23824473 tfbsConsSites V$RREB1_01 score:840, zScore:2.19, srow:5340605
30253 chr9 23824548 23824563 tfbsConsSites V$AHRARNT_01 score:844, zScore:1.95, srow:5340606
30253 chr9 23824561 23824575 tfbsConsSites V$TAXCREB_02 score:774, zScore:2.2, srow:5340607
30253 chr9 23824563 23824574 tfbsConsSites V$PAX4_03 score:915, zScore:1.82, srow:5340608
30253 chr9 23824563 23824576 tfbsConsSites V$P300_01 score:849, zScore:1.8, srow:5340609
30253 chr9 23824564 23824577 tfbsConsSites V$RREB1_01 score:842, zScore:2.23, srow:5340610
30253 chr9 23824584 23824594 tfbsConsSites V$POU6F1_01 score:851, zScore:1.9, srow:5340611
30253 chr9 23824077 23824107 phastConsElements100way lod=72 score:417, srow:9200082
30253 chr9 23824110 23824118 phastConsElements100way lod=20 score:290, srow:9200083
30253 chr9 23824121 23824153 phastConsElements100way lod=105 score:454, srow:9200084
30253 chr9 23824155 23824172 phastConsElements100way lod=33 score:340, srow:9200085
30253 chr9 23824174 23824183 phastConsElements100way lod=25 score:312, srow:9200086
30253 chr9 23824196 23824210 phastConsElements100way lod=45 score:370, srow:9200087
30253 chr9 23824213 23824217 phastConsElements100way lod=13 score:247, srow:9200088
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  • 25 of 33 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
30253 cellmeth_recounts PrEC: 1, LNCaP: 156, DU145: 18
30253 cellmeth_diffreps_PrECvsLNCaP A=2, B=125, Length=700, Event=Up, log2FC=5.97, padj=0
30253 cellmeth_diffreps_LNCaPvsDU145 A=129.35, B=12.16, Length=560, Event=Down, log2FC=-3.41, padj=0
30253 cellexp id=ENSG00000107105, name=ELAVL2, PrEC=986, str=238, LNCaP=91, str=131, DU145=0, str=0
30253 tcgameth site:cg13932029, B=0.22, L=0.56, H=0.49
30253 tcgaexp gene=ELAVL2, entrez=1993, pos=chr9:23690103-23826063(-), B=63, L=190, M=163, H=221