DMR 3049 chr5:149952201-149952400 (200bp)

DMR Stats
Positionchr5:149952201-149952400 (View on UCSC)
Width200bp
Genomic Contextintergenic
Nearest GenesNDST1 (14427bp away)
ANODEV p-value2.11403055422e-05
FrequenciesBenign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 0.0 (0.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
3049 chr5 149952086 149952255 wgEncodeRegDnaseClusteredV2 2 score:245, srow:979847
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
3049 cellmeth_recounts PrEC: 1, LNCaP: 0, DU145: 20
3049 cellmeth_diffreps_PrECvsLNCaP A=3, B=23, Length=360, Event=Up, log2FC=2.94, padj=0.00110728063678817
3049 cellmeth_diffreps_PrECvsDU145 A=6, B=63, Length=640, Event=Up, log2FC=3.39, padj=1.76491394033267e-11
3049 cellmeth_diffreps_PrECvsDU145 A=3, B=25, Length=380, Event=Up, log2FC=3.06, padj=0.000450548870757401
3049 cellmeth_diffreps_LNCaPvsDU145 A=0, B=15.9, Length=360, Event=Up, log2FC=Inf, padj=0.000457622302526381