DMR 30688 chr9:133760901-133761200 (300bp)

DMR Stats
Positionchr9:133760901-133761200 (View on UCSC)
Width300bp
Genomic Contextexon
Nearest GenesABL1 (0bp away)
ANODEV p-value0.00268465311702
FrequenciesBenign: 2.0 (28.57%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
30688 ABL1 30188 uc004bzv.3 chr9 133589268 133763062 + 300 100.0 0.09 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (100) 0.0
30688 ABL1 30188 uc004bzw.3 chr9 133710831 133763062 + 300 100.0 1.44 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (100) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
30688 chr9 133760901 133761375 wgEncodeRegDnaseClusteredV2 11 score:498, srow:1245275
30688 chr9 133760779 133761168 wgEncodeRegTfbsClusteredV3 RFX5 score:488, expCount:3, expNums:356,406,449, expScores:488,224,186, srow:4263188
30688 chr9 133760936 133760946 tfbsConsSites V$FOXO4_01 score:928, zScore:1.99, srow:5514130
30688 chr9 133761013 133761030 tfbsConsSites V$CEBP_C score:810, zScore:1.79, srow:5514131
30688 chr9 133760928 133760928 cosmic COSM1701828 srow:1218455
30688 chr9 133760928 133760928 cosmic COSM1701829 srow:1218456
30688 chr9 133760928 133760928 cosmic COSM1701830 srow:1218457
30688 chr9 133760930 133760930 cosmic COSM1330687 srow:1218458
30688 chr9 133760930 133760930 cosmic COSM1330688 srow:1218459
30688 chr9 133760960 133760960 cosmic COSM1460565 srow:1218460
30688 chr9 133760960 133760960 cosmic COSM1460566 srow:1218461
30688 chr9 133760965 133760965 cosmic COSM1648116 srow:1218462
30688 chr9 133760965 133760965 cosmic COSM1648117 srow:1218463
30688 chr9 133760965 133760965 cosmic COSM752539 srow:1218464
30688 chr9 133760999 133760999 cosmic COSM136749 srow:1218465
30688 chr9 133760888 133760928 phastConsElements100way lod=512 score:611, srow:9503355
30688 chr9 133760930 133760979 phastConsElements100way lod=600 score:627, srow:9503356
30688 chr9 133760981 133760982 phastConsElements100way lod=25 score:312, srow:9503357
30688 chr9 133760984 133760985 phastConsElements100way lod=21 score:295, srow:9503358
30688 chr9 133760987 133760988 phastConsElements100way lod=29 score:327, srow:9503359
30688 chr9 133760990 133760991 phastConsElements100way lod=31 score:333, srow:9503360
30688 chr9 133760994 133760994 phastConsElements100way lod=14 score:255, srow:9503361
30688 chr9 133760996 133761000 phastConsElements100way lod=50 score:381, srow:9503362
30688 chr9 133761002 133761003 phastConsElements100way lod=25 score:312, srow:9503363
30688 chr9 133761005 133761009 phastConsElements100way lod=42 score:363, srow:9503364
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  • 25 of 31 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
30688 cellmeth_recounts PrEC: 9, LNCaP: 4, DU145: 26
30688 cellmeth_diffreps_PrECvsLNCaP A=183, B=10, Length=560, Event=Down, log2FC=-4.19, padj=0
30688 cellmeth_diffreps_PrECvsDU145 A=182, B=33, Length=520, Event=Down, log2FC=-2.46, padj=0
30688 cellmeth_diffreps_LNCaPvsDU145 A=1.07, B=17.77, Length=220, Event=Up, log2FC=4.06, padj=0.00280247687576882
30688 cellexp id=ENSG00000097007, name=ABL1, PrEC=7889, str=7687, LNCaP=6067, str=4403, DU145=10654, str=9807
30688 tcgaexp gene=ABL1, entrez=25, pos=chr9:133589268-133763062(+), B=7570, L=7395, M=7230, H=8016