DMR 31200 chr10:102893551-102895200 (1650bp)

DMR Stats
Positionchr10:102893551-102895200 (View on UCSC)
Width1650bp
Genomic Contextexon
Nearest GenesTLX1 (0bp away)
ANODEV p-value3.48228355341e-05
FrequenciesBenign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
31200 TLX1 3776 uc001ksw.3 chr10 102891061 102897546 + 1650 100.0 2.05 0 0.0 E1 (0), I1 (23.09), E2 (12.24), I2 (64.73), E3 (0) 0.0
31200 TLX1 3776 uc021pxd.1 chr10 102891061 102897546 + 1650 100.0 0.8 0 0.0 E1 (0), I1 (23.09), E2 (12.24), I2 (64.73), E3 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
31200 chr10 102890446 102893895 wgEncodeRegDnaseClusteredV2 56 score:1000, srow:165841
31200 chr10 102893926 102895155 wgEncodeRegDnaseClusteredV2 42 score:402, srow:165842
31200 chr10 102895166 102895435 wgEncodeRegDnaseClusteredV2 5 score:351, srow:165843
31200 chr10 102890189 102897863 wgEncodeRegTfbsClusteredV3 EZH2 score:879, expCount:11, expNums:3,6,13,15,17,19,21,36,38,40,43, expScores:139,415,351,225,171,100,322,288,450,252,305, srow:590425
31200 chr10 102893342 102894065 wgEncodeRegTfbsClusteredV3 RBBP5 score:222, expCount:1, expNums:33, expScores:222, srow:590434
31200 chr10 102893421 102894016 wgEncodeRegTfbsClusteredV3 ZNF263 score:314, expCount:1, expNums:368, expScores:314, srow:590435
31200 chr10 102893462 102893997 wgEncodeRegTfbsClusteredV3 SUZ12 score:176, expCount:1, expNums:358, expScores:154, srow:590436
31200 chr10 102893553 102893876 wgEncodeRegTfbsClusteredV3 E2F6 score:199, expCount:1, expNums:215, expScores:199, srow:590437
31200 chr10 102893575 102893918 wgEncodeRegTfbsClusteredV3 PHF8 score:361, expCount:1, expNums:30, expScores:361, srow:590438
31200 chr10 102894181 102894726 wgEncodeRegTfbsClusteredV3 SUZ12 score:218, expCount:2, expNums:358,578, expScores:159,218, srow:590439
31200 chr10 102893867 102893880 tfbsConsSites V$ATF_01 score:874, zScore:2.54, srow:679919
31200 chr10 102893893 102893913 tfbsConsSites V$PPARG_01 score:743, zScore:1.97, srow:679920
31200 chr10 102893897 102893926 tfbsConsSites V$HOX13_01 score:737, zScore:2.25, srow:679921
31200 chr10 102893899 102893919 tfbsConsSites V$PAX6_01 score:762, zScore:1.8, srow:679922
31200 chr10 102893927 102893941 tfbsConsSites V$TAXCREB_01 score:809, zScore:2.27, srow:679923
31200 chr10 102893935 102893948 tfbsConsSites V$GATA1_02 score:925, zScore:3.42, srow:679924
31200 chr10 102893937 102893945 tfbsConsSites V$GATA3_01 score:950, zScore:2.19, srow:679925
31200 chr10 102893937 102893945 tfbsConsSites V$LMO2COM_02 score:963, zScore:2.94, srow:679926
31200 chr10 102893944 102893959 tfbsConsSites V$ELK1_01 score:893, zScore:2.61, srow:679927
31200 chr10 102893947 102893956 tfbsConsSites V$CETS1P54_01 score:966, zScore:2.14, srow:679928
31200 chr10 102893951 102893959 tfbsConsSites V$ZIC1_01 score:913, zScore:1.68, srow:679929
31200 chr10 102894018 102894047 tfbsConsSites V$HOX13_01 score:745, zScore:2.4, srow:679930
31200 chr10 102894059 102894079 tfbsConsSites V$NRSF_01 score:743, zScore:2.26, srow:679931
31200 chr10 102894069 102894083 tfbsConsSites V$E2F_01 score:779, zScore:2.1, srow:679932
31200 chr10 102894073 102894085 tfbsConsSites V$TCF11_01 score:929, zScore:1.98, srow:679933
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  • 25 of 70 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
31200 cellmeth_recounts PrEC: 15, LNCaP: 184, DU145: 61
31200 cellmeth_diffreps_PrECvsLNCaP A=16, B=108, Length=720, Event=Up, log2FC=2.75, padj=0
31200 cellmeth_diffreps_PrECvsLNCaP A=0, B=13, Length=200, Event=Up, log2FC=Inf, padj=0.000827318446465587
31200 cellmeth_diffreps_LNCaPvsDU145 A=118.66, B=18.71, Length=720, Event=Down, log2FC=-2.67, padj=0
31200 cellexp id=ENSG00000107807, name=TLX1, PrEC=0, str=0, LNCaP=11, str=0, DU145=2, str=1
31200 tcgameth site:cg00741609, B=0.26, L=0.52, H=0.52
31200 tcgameth site:cg04273871, B=0.26, L=0.42, H=0.44
31200 tcgameth site:cg07416656, B=0.17, L=0.38, H=0.38
31200 tcgameth site:cg07915434, B=0.17, L=0.37, H=0.41
31200 tcgameth site:cg08487063, B=0.12, L=0.42, H=0.42
31200 tcgameth site:cg12118269, B=0.23, L=0.62, H=0.56
31200 tcgameth site:cg14861089, B=0.17, L=0.71, H=0.7
31200 tcgameth site:cg23340017, B=0.36, L=0.62, H=0.58
31200 tcgameth site:cg24812837, B=0.08, L=0.46, H=0.48
31200 tcgameth site:cg25266629, B=0.14, L=0.51, H=0.55
31200 tcgaexp gene=TLX1, entrez=3195, pos=chr10:102891061-102897546(+), B=1, L=1, M=2, H=3
31200 tcgaexp gene=DUX4, entrez=22947, pos=chr10:76142-191000255(+), B=0, L=0, M=0, H=0