DMR 31317 chr10:124250901-124251100 (200bp)

DMR Stats
Positionchr10:124250901-124251100 (View on UCSC)
Width200bp
Genomic Contextintron
Nearest GenesHTRA1 (0bp away)
ANODEV p-value0.0469000956902
FrequenciesBenign: 2.0 (28.57%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
31317 HTRA1 3959 uc001lgj.2 chr10 124221041 124274424 + 200 100.0 0.19 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (100), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
31317 chr10 124250721 124251235 wgEncodeRegDnaseClusteredV2 50 score:1000, srow:176282
31317 chr10 124250457 124251046 wgEncodeRegTfbsClusteredV3 POLR2A score:198, expCount:1, expNums:41, expScores:198, srow:623797
31317 chr10 124250746 124251144 wgEncodeRegTfbsClusteredV3 CTCF score:206, expCount:5, expNums:39,635,664,671,683, expScores:151,146,135,206,134, srow:623798
31317 chr10 124250758 124251087 wgEncodeRegTfbsClusteredV3 IRF4 score:209, expCount:1, expNums:92, expScores:209, srow:623799
31317 chr10 124250828 124251137 wgEncodeRegTfbsClusteredV3 PAX5 score:241, expCount:2, expNums:100,101, expScores:241,210, srow:623800
31317 chr10 124250871 124251025 wgEncodeRegTfbsClusteredV3 RUNX3 score:502, expCount:1, expNums:109, expScores:502, srow:623801
31317 chr10 124250872 124251006 wgEncodeRegTfbsClusteredV3 BATF score:528, expCount:1, expNums:81, expScores:528, srow:623802
31317 chr10 124250882 124251229 wgEncodeRegTfbsClusteredV3 MYC score:649, expCount:2, expNums:560,561, expScores:649,198, srow:623803
31317 chr10 124250987 124251004 tfbsConsSites V$NF1_Q6 score:883, zScore:1.88, srow:736494
31317 chr10 124251070 124251082 tfbsConsSites V$CEBP_01 score:899, zScore:1.74, srow:736495
31317 chr10 124251078 124251089 tfbsConsSites V$EGR1_01 score:866, zScore:2.29, srow:736496
31317 chr10 124251078 124251089 tfbsConsSites V$EGR2_01 score:887, zScore:2.62, srow:736497
31317 chr10 124251078 124251089 tfbsConsSites V$EGR3_01 score:845, zScore:2.04, srow:736498
31317 chr10 124251078 124251089 tfbsConsSites V$NGFIC_01 score:877, zScore:2.45, srow:736499
31317 chr10 124250901 124250912 phastConsElements100way lod=48 score:377, srow:1277570
31317 chr10 124250923 124250944 phastConsElements100way lod=44 score:368, srow:1277571
31317 chr10 124250952 124250957 phastConsElements100way lod=20 score:290, srow:1277572
31317 chr10 124250999 124251004 phastConsElements100way lod=17 score:274, srow:1277573
31317 chr10 124251082 124251086 phastConsElements100way lod=24 score:308, srow:1277574
  • 19 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
31317 cellmeth_recounts PrEC: 0, LNCaP: 6, DU145: 5
31317 cellexp id=ENSG00000166033, name=HTRA1, PrEC=16182, str=45430, LNCaP=130, str=75, DU145=1415, str=1396
31317 tcgaexp gene=HTRA1, entrez=5654, pos=chr10:124221041-124274424(+), B=4089, L=3103, M=2853, H=3018
31317 tcgaexp gene=DUX4, entrez=22947, pos=chr10:76142-191000255(+), B=0, L=0, M=0, H=0
31317 tcgaexp gene=FAM45B, entrez=55855, pos=chr10:120863611-129631421(+), B=500, L=423, M=440, H=462