DMineR

DMR Stats
Position	chr11:569201-569400 (View on UCSC)
Width	200bp
Genomic Context	promoter
Nearest Genes	MIR210HG (743bp away)
ANODEV p-value	0.00109795322966
Frequencies	Benign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid	Gene Symbol	Gene Id	Isoform Id	Isoform Chr	Isoform Start	Isoform End	Isoform Strand	Overlap Bp	Query Overlap Per	Isoform Overlap Per	Noncoding	Promoter Per	Exonintron Per	End Per

Feature Overlaps

Dmrid	Feature Chr	Feature Start	Feature End	Set	Name	Fields
31437	chr11	569066	569695	wgEncodeRegDnaseClusteredV2	22	score:656, srow:184996
31437	chr11	567815	569244	wgEncodeRegTfbsClusteredV3	POLR2A	score:1000, expCount:44, expNums:61,62,78,105,131,163,168,192,206,207,229,275,283,306,328,330,332,334,336,338,340,362,366,402,445,465,522,523,525,563,564,577,583,585,596,599,602,613,616,619,622,632,633,637, expScores:1000,1000,611,1000,597,324,340,377,519,388,573,264,161,473,320,173,572,561,375,266,663,144,168,644,223,442,244,335,371,291,206,386,490,185,491,136,213,273,218,210,375,304,361,186, srow:640296
31437	chr11	568512	569642	wgEncodeRegTfbsClusteredV3	CHD1	score:1000, expCount:3, expNums:23,287,344, expScores:210,1000,218, srow:640329
31437	chr11	568676	569238	wgEncodeRegTfbsClusteredV3	PHF8	score:782, expCount:1, expNums:30, expScores:588, srow:640346
31437	chr11	568778	569501	wgEncodeRegTfbsClusteredV3	RBBP5	score:196, expCount:1, expNums:33, expScores:196, srow:640348
31437	chr11	569255	569830	wgEncodeRegTfbsClusteredV3	KDM5B	score:198, expCount:1, expNums:31, expScores:198, srow:640351
31437	chr11	567939	569461	cpgIsland	CpG: 149	length:1523, cpgNum:149, gcNum:1002, perCpg:19.6, perGc:65.8, obsExp:0.9, srow:3645

7 featuress

Omics Overlaps

Dmrid	Omic Set	Data	Plot
31437	cellmeth_recounts	PrEC: 0, LNCaP: 39, DU145: 5
31437	cellmeth_diffreps_PrECvsLNCaP	A=24, B=136, Length=860, Event=Up, log2FC=2.5, padj=0
31437	cellmeth_diffreps_LNCaPvsDU145	A=147.53, B=5.61, Length=860, Event=Down, log2FC=-4.72, padj=0