DMR 31442 chr11:725501-725850 (350bp)
| DMR Stats | |
|---|---|
| Position | chr11:725501-725850 (View on UCSC) |
| Width | 350bp |
| Genomic Context | exon |
| Nearest Genes | EPS8L2 (0bp away) |
| ANODEV p-value | 0.00184273146796 |
| Frequencies | Benign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 8.0 (88.89 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31442 | EPS8L2 | 4102 | uc001lqt.3 | chr11 | 706120 | 727727 | + | 350 | 100.0 | 0.03 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (64.86), E17 (34.29), I17 (1.14), E18 (0), I18 (0), E19 (0), I19 (0), E20 (0), I20 (0), E21 (0) | 0.0 |
| 31442 | EPS8L2 | 4102 | uc001lqu.3 | chr11 | 706629 | 727727 | + | 350 | 100.0 | 0.03 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (64.86), E17 (34.29), I17 (1.14), E18 (0), I18 (0), E19 (0), I19 (0), E20 (0), I20 (0), E21 (0) | 0.0 |
| 31442 | EPS8L2 | 4102 | uc001lqv.3 | chr11 | 709879 | 727727 | + | 350 | 100.0 | 0.03 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (64.86), E14 (34.29), I14 (1.14), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (0), E18 (0) | 0.0 |
| 31442 | EPS8L2 | 4102 | uc001lqw.3 | chr11 | 721064 | 727727 | + | 350 | 100.0 | 0.03 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (64.86), E9 (34.29), I9 (1.14), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0) | 0.0 |
| 31442 | EPS8L2 | 4102 | uc001lqx.3 | chr11 | 721926 | 727727 | + | 350 | 100.0 | 0.05 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (64.86), E5 (34.29), I5 (1.14), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0) | 0.0 |
| 31442 | EPS8L2 | 4102 | uc001lqy.3 | chr11 | 724562 | 727727 | + | 350 | 100.0 | 0.03 | 0 | 0.0 | E1 (0), I1 (64.86), E2 (34.29), I2 (1.14), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) | 0.0 |
| 31442 | EPS8L2 | 4102 | uc010qwk.2 | chr11 | 709330 | 727727 | + | 350 | 100.0 | 0.03 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (64.86), E16 (34.29), I16 (1.14), E17 (0), I17 (0), E18 (0), I18 (0), E19 (0), I19 (0), E20 (0) | 0.0 |
- 7 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 31442 | chr11 | 725486 | 726215 | wgEncodeRegDnaseClusteredV2 | 33 | score:1000, srow:185134 |
| 31442 | chr11 | 725550 | 726807 | wgEncodeRegTfbsClusteredV3 | POLR2A | score:1000, expCount:12, expNums:105,228,229,328,330,332,336,340,522,602,610,622, expScores:1000,226,778,191,267,497,182,302,180,143,145,385, srow:641041 |
| 31442 | chr11 | 725625 | 725898 | wgEncodeRegTfbsClusteredV3 | NRF1 | score:309, expCount:2, expNums:303,354, expScores:249,309, srow:641042 |
| 31442 | chr11 | 725739 | 725986 | wgEncodeRegTfbsClusteredV3 | ZBTB7A | score:343, expCount:1, expNums:247, expScores:343, srow:641043 |
| 31442 | chr11 | 725720 | 725735 | tfbsConsSites | V$E47_02 | score:902, zScore:2.11, srow:769022 |
| 31442 | chr11 | 725722 | 725733 | tfbsConsSites | V$LMO2COM_01 | score:955, zScore:2.23, srow:769023 |
| 31442 | chr11 | 725722 | 725733 | tfbsConsSites | V$MYOD_01 | score:904, zScore:1.97, srow:769024 |
| 31442 | chr11 | 725735 | 725753 | tfbsConsSites | V$SEF1_C | score:762, zScore:2.5, srow:769025 |
| 31442 | chr11 | 725746 | 725759 | tfbsConsSites | V$CEBPB_02 | score:849, zScore:1.7, srow:769026 |
| 31442 | chr11 | 725753 | 725762 | tfbsConsSites | V$HSF2_01 | score:924, zScore:1.85, srow:769027 |
| 31442 | chr11 | 725787 | 725804 | tfbsConsSites | V$CEBP_C | score:874, zScore:3.14, srow:769028 |
| 31442 | chr11 | 725806 | 725829 | tfbsConsSites | V$COMP1_01 | score:783, zScore:1.64, srow:769029 |
| 31442 | chr11 | 725714 | 725714 | phastConsElements100way | lod=14 | score:255, srow:1314580 |
| 31442 | chr11 | 725725 | 725735 | phastConsElements100way | lod=112 | score:461, srow:1314581 |
| 31442 | chr11 | 725737 | 725738 | phastConsElements100way | lod=31 | score:333, srow:1314582 |
| 31442 | chr11 | 725743 | 725759 | phastConsElements100way | lod=207 | score:521, srow:1314583 |
| 31442 | chr11 | 725764 | 725771 | phastConsElements100way | lod=51 | score:383, srow:1314584 |
| 31442 | chr11 | 725773 | 725780 | phastConsElements100way | lod=62 | score:402, srow:1314585 |
| 31442 | chr11 | 725782 | 725786 | phastConsElements100way | lod=63 | score:404, srow:1314586 |
| 31442 | chr11 | 725788 | 725792 | phastConsElements100way | lod=58 | score:395, srow:1314587 |
| 31442 | chr11 | 725797 | 725807 | phastConsElements100way | lod=86 | score:434, srow:1314588 |
| 31442 | chr11 | 725809 | 725812 | phastConsElements100way | lod=16 | score:268, srow:1314589 |
| 31442 | chr11 | 725821 | 725825 | phastConsElements100way | lod=55 | score:390, srow:1314590 |
| 31442 | chr11 | 725842 | 725852 | phastConsElements100way | lod=58 | score:395, srow:1314591 |
| 31442 | chr11 | 725597 | 726870 | cpgIsland | CpG: 112 | length:1274, cpgNum:112, gcNum:882, perCpg:17.6, perGc:69.2, obsExp:0.74, srow:3663 |
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Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 31442 | cellmeth_recounts | PrEC: 80, LNCaP: 181, DU145: 23 |  |
| 31442 | cellmeth_diffreps_PrECvsDU145 | A=0, B=12, Length=240, Event=Up, log2FC=Inf, padj=0.00174045876043459 |  |
| 31442 | cellmeth_diffreps_PrECvsDU145 | A=120, B=18, Length=560, Event=Down, log2FC=-2.74, padj=0 |  |
| 31442 | cellmeth_diffreps_LNCaPvsDU145 | A=301.47, B=24.32, Length=1480, Event=Down, log2FC=-3.63, padj=0 |  |
| 31442 | cellexp | id=ENSG00000177106, name=EPS8L2, PrEC=10480, str=16784, LNCaP=6280, str=4122, DU145=8692, str=8490 |  |
| 31442 | cellexp | id=ENSG00000269915, name=AP006621.9, PrEC=16, str=34, LNCaP=5, str=2, DU145=10, str=10 |  |
| 31442 | tcgaexp | gene=EPS8L2, entrez=64787, pos=chr11:706120-727727(+), B=3907, L=3956, M=3784, H=4084 |  |