DMR 31444 chr11:829751-831050 (1300bp)

DMR Stats
Positionchr11:829751-831050 (View on UCSC)
Width1300bp
Genomic Contextpromoter
Nearest GenesEFCAB4A, JB050151 (0bp away)
ANODEV p-value0.00273216338581
FrequenciesBenign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
31444 EFCAB4A 4113 uc001lrv.2 chr11 828230 831991 + 1300 100.0 0.04 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (18.08), E4 (11.31), I4 (9.08), E5 (6.77), I5 (21.85), E6 (7.15), I6 (11.77), E7 (12.85), I7 (1.46), E8 (0), I8 (0), E9 (0) 4.54
31444 EFCAB4A 4113 uc001lrw.2 chr11 829297 831991 + 1300 100.0 0.03 0 3.54 E1 (0), I1 (18.08), E2 (11.31), I2 (9.08), E3 (35.69), I3 (11.77), E4 (14.23), I4 (0), E5 (0) 4.54
31444 EFCAB4A 4113 uc009ycm.1 chr11 827585 831991 + 1300 100.0 0.51 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (18.08), E5 (11.31), I5 (9.08), E6 (6.77), I6 (21.85), E7 (7.15), I7 (26), E8 (0), I8 (0), E9 (0) 4.54
31444 JB050151 4114 uc021qbq.1 chr11 830713 830732 - 20 1.54 0.51 1 62.92 E1 (1.54) 100.0
  • 4 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
31444 chr11 829401 829810 wgEncodeRegDnaseClusteredV2 27 score:1000, srow:185243
31444 chr11 829841 830215 wgEncodeRegDnaseClusteredV2 11 score:524, srow:185244
31444 chr11 830241 830510 wgEncodeRegDnaseClusteredV2 89 score:1000, srow:185245
31444 chr11 830586 831155 wgEncodeRegDnaseClusteredV2 28 score:753, srow:185246
31444 chr11 829536 829845 wgEncodeRegTfbsClusteredV3 POU2F2 score:794, expCount:2, expNums:106,125, expScores:794,361, srow:641848
31444 chr11 829660 829923 wgEncodeRegTfbsClusteredV3 EBF1 score:164, expCount:1, expNums:86, expScores:164, srow:641849
31444 chr11 829678 830277 wgEncodeRegTfbsClusteredV3 CTBP2 score:125, expCount:1, expNums:348, expScores:125, srow:641850
31444 chr11 829970 830746 wgEncodeRegTfbsClusteredV3 POLR2A score:496, expCount:10, expNums:191,192,206,207,256,275,328,445,616,619, expScores:357,496,201,365,143,315,186,92,323,216, srow:641851
31444 chr11 830046 830535 wgEncodeRegTfbsClusteredV3 TAF1 score:139, expCount:1, expNums:157, expScores:139, srow:641852
31444 chr11 830089 830928 wgEncodeRegTfbsClusteredV3 EZH2 score:274, expCount:1, expNums:38, expScores:274, srow:641853
31444 chr11 830129 830528 wgEncodeRegTfbsClusteredV3 MXI1 score:191, expCount:1, expNums:441, expScores:191, srow:641854
31444 chr11 830181 830560 wgEncodeRegTfbsClusteredV3 NFYB score:453, expCount:1, expNums:302, expScores:453, srow:641855
31444 chr11 830198 830485 wgEncodeRegTfbsClusteredV3 USF2 score:393, expCount:3, expNums:319,360,455, expScores:393,393,169, srow:641856
31444 chr11 830217 830736 wgEncodeRegTfbsClusteredV3 SIN3A score:180, expCount:1, expNums:357, expScores:180, srow:641857
31444 chr11 830226 830549 wgEncodeRegTfbsClusteredV3 SP1 score:158, expCount:1, expNums:153, expScores:158, srow:641858
31444 chr11 830243 830482 wgEncodeRegTfbsClusteredV3 USF1 score:1000, expCount:4, expNums:118,161,202,265, expScores:395,1000,606,330, srow:641859
31444 chr11 830794 831053 wgEncodeRegTfbsClusteredV3 TCF12 score:223, expCount:1, expNums:116, expScores:223, srow:641860
31444 chr11 830848 831063 wgEncodeRegTfbsClusteredV3 CTCF score:149, expCount:1, expNums:137, expScores:149, srow:641861
31444 chr11 830865 830943 wgEncodeRegTfbsClusteredV3 TCF3 score:322, expCount:1, expNums:117, expScores:322, srow:641862
31444 chr11 830247 830261 tfbsConsSites V$E2F_01 score:791, zScore:2.34, srow:769498
31444 chr11 830256 830275 tfbsConsSites V$ARNT_02 score:797, zScore:2.05, srow:769499
31444 chr11 830622 830643 tfbsConsSites V$OLF1_01 score:802, zScore:1.8, srow:769500
31444 chr11 830681 830699 tfbsConsSites V$AHRARNT_02 score:771, zScore:1.68, srow:769501
31444 chr11 830688 830706 tfbsConsSites V$SEF1_C score:724, zScore:1.75, srow:769502
31444 chr11 830867 830888 tfbsConsSites V$HEN1_02 score:793, zScore:2.28, srow:769503
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  • 25 of 67 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
31444 cellmeth_recounts PrEC: 4, LNCaP: 855, DU145: 3
31444 cellmeth_diffreps_PrECvsLNCaP A=64, B=824, Length=1980, Event=Up, log2FC=3.69, padj=0
31444 cellmeth_diffreps_LNCaPvsDU145 A=1075.46, B=7.48, Length=3680, Event=Down, log2FC=-7.17, padj=0
31444 cellexp id=ENSG00000177685, name=EFCAB4A, PrEC=15, str=20, LNCaP=3830, str=969, DU145=616, str=384
31444 cellexp id=ENSG00000255108, name=AP006621.8, PrEC=0, str=0, LNCaP=8, str=3, DU145=5, str=1
31444 tcgameth site:cg00420348, B=0.2, L=0.56, H=0.54
31444 tcgameth site:cg16570157, B=0.09, L=0.57, H=0.48
31444 tcgameth site:cg20801007, B=0.15, L=0.58, H=0.57
31444 tcgameth site:cg22773555, B=0.17, L=0.56, H=0.57
31444 tcgaexp gene=EFCAB4A, entrez=283229, pos=chr11:826157-831991(+), B=1993, L=4864, M=4177, H=3153